Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 AC090340.1-201ENST00000620778 4980 ntBASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 AC022517.1-201ENST00000592429 346 ntBASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 BX323043.1-201ENST00000641006 1765 ntBASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV30A0A087WSZ9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV30A0A087WSZ9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV30A0A087WSZ9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV30A0A087WSZ9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRAV30A0A087WSZ9 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TRAV30A0A087WSZ9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV30A0A087WSZ9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV30A0A087WSZ9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.37■□□□□ 0.05
TRAV30A0A087WSZ9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC15.37■□□□□ 0.05
TRAV30A0A087WSZ9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV30A0A087WSZ9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRAV30A0A087WSZ9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV30A0A087WSZ9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV30A0A087WSZ9 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV30A0A087WSZ9 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV30A0A087WSZ9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV30A0A087WSZ9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV30A0A087WSZ9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV30A0A087WSZ9 AC018445.3-201ENST00000624177 1945 ntBASIC15.37■□□□□ 0.05
TRAV30A0A087WSZ9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV30A0A087WSZ9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TRAV30A0A087WSZ9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV30A0A087WSZ9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV30A0A087WSZ9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV30A0A087WSZ9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms