Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 AC000111.2-201ENST00000448200 210 ntBASIC5.22□□□□□ -1.57
CHD7Q9P2D1 RPL7P19-201ENST00000469948 618 ntBASIC5.22□□□□□ -1.57
CHD7Q9P2D1 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 AC106785.1-201ENST00000565935 262 ntBASIC5.22□□□□□ -1.57
CHD7Q9P2D1 MIR4301-201ENST00000577203 66 ntBASIC5.22□□□□□ -1.57
CHD7Q9P2D1 MIR3138-201ENST00000585238 82 ntBASIC5.22□□□□□ -1.57
CHD7Q9P2D1 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 AL591034.3-201ENST00000605511 685 ntBASIC5.22□□□□□ -1.57
CHD7Q9P2D1 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 SMG1P7-201ENST00000565246 2704 ntBASIC5.22□□□□□ -1.57
CHD7Q9P2D1 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CHD7Q9P2D1 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CHD7Q9P2D1 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC5.21□□□□□ -1.57
CHD7Q9P2D1 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.57
CHD7Q9P2D1 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.57
CHD7Q9P2D1 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
CHD7Q9P2D1 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
CHD7Q9P2D1 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CHD7Q9P2D1 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHD7Q9P2D1 ATP5HP3-201ENST00000396994 486 ntBASIC5.21□□□□□ -1.58
CHD7Q9P2D1 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.21□□□□□ -1.58
CHD7Q9P2D1 AC090948.1-201ENST00000607464 549 ntBASIC5.21□□□□□ -1.58
CHD7Q9P2D1 AL356608.1-201ENST00000610034 820 ntBASIC5.21□□□□□ -1.58
CHD7Q9P2D1 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHD7Q9P2D1 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CHD7Q9P2D1 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CHD7Q9P2D1 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHD7Q9P2D1 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHD7Q9P2D1 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CHD7Q9P2D1 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHD7Q9P2D1 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CHD7Q9P2D1 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC5.21□□□□□ -1.58
CHD7Q9P2D1 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CHD7Q9P2D1 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.21□□□□□ -1.58
CHD7Q9P2D1 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHD7Q9P2D1 U3.28-201ENST00000391249 210 ntBASIC5.21□□□□□ -1.58
CHD7Q9P2D1 AL357515.1-201ENST00000402967 542 ntBASIC5.21□□□□□ -1.58
CHD7Q9P2D1 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.21□□□□□ -1.58
CHD7Q9P2D1 YWHAZP2-201ENST00000440317 728 ntBASIC5.21□□□□□ -1.58
CHD7Q9P2D1 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.21□□□□□ -1.58
CHD7Q9P2D1 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.21□□□□□ -1.58
CHD7Q9P2D1 RPS5P7-201ENST00000456664 608 ntBASIC5.21□□□□□ -1.58
CHD7Q9P2D1 RN7SL542P-201ENST00000467147 294 ntBASIC5.21□□□□□ -1.58
CHD7Q9P2D1 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.21□□□□□ -1.58
CHD7Q9P2D1 RN7SKP98-201ENST00000517070 156 ntBASIC5.21□□□□□ -1.58
CHD7Q9P2D1 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.21□□□□□ -1.58
CHD7Q9P2D1 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CHD7Q9P2D1 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHD7Q9P2D1 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CHD7Q9P2D1 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.21□□□□□ -1.58
CHD7Q9P2D1 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.21□□□□□ -1.58
CHD7Q9P2D1 AL731532.1-201ENST00000623972 4236 ntBASIC5.2□□□□□ -1.58
CHD7Q9P2D1 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 SNORA71.3-201ENST00000362582 128 ntBASIC5.2□□□□□ -1.58
CHD7Q9P2D1 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 AL121932.1-201ENST00000605542 214 ntBASIC5.2□□□□□ -1.58
CHD7Q9P2D1 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 RNU1-85P-201ENST00000364127 164 ntBASIC5.2□□□□□ -1.58
CHD7Q9P2D1 SNORA70H-201ENST00000383910 135 ntBASIC5.2□□□□□ -1.58
CHD7Q9P2D1 SNORA70J-201ENST00000384182 135 ntBASIC5.2□□□□□ -1.58
CHD7Q9P2D1 RPL23AP93-201ENST00000440847 484 ntBASIC5.2□□□□□ -1.58
CHD7Q9P2D1 PHBP16-201ENST00000446318 950 ntBASIC5.2□□□□□ -1.58
CHD7Q9P2D1 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 RNA5SP196-201ENST00000625967 102 ntBASIC5.2□□□□□ -1.58
CHD7Q9P2D1 CASC19-255ENST00000641733 1385 ntBASIC5.2□□□□□ -1.58
CHD7Q9P2D1 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 AC018628.1-201ENST00000624147 3819 ntBASIC5.2□□□□□ -1.58
CHD7Q9P2D1 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms