Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC4.92□□□□□ -1.62
CHD8Q9HCK8 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.92□□□□□ -1.62
CHD8Q9HCK8 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CHD8Q9HCK8 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC4.92□□□□□ -1.62
CHD8Q9HCK8 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CHD8Q9HCK8 SAMMSON-226ENST00000642089 1582 ntBASIC4.92□□□□□ -1.62
CHD8Q9HCK8 RNA5SP191-201ENST00000362585 102 ntBASIC4.92□□□□□ -1.62
CHD8Q9HCK8 SNORA62.3-201ENST00000365110 153 ntBASIC4.92□□□□□ -1.62
CHD8Q9HCK8 MIR129-1-201ENST00000384972 72 ntBASIC4.92□□□□□ -1.62
CHD8Q9HCK8 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.92□□□□□ -1.62
CHD8Q9HCK8 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.92□□□□□ -1.62
CHD8Q9HCK8 RPL7P19-201ENST00000469948 618 ntBASIC4.92□□□□□ -1.62
CHD8Q9HCK8 AC090424.1-201ENST00000535243 736 ntBASIC4.92□□□□□ -1.62
CHD8Q9HCK8 AC021106.3-201ENST00000623925 531 ntBASIC4.92□□□□□ -1.62
CHD8Q9HCK8 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CHD8Q9HCK8 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CHD8Q9HCK8 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.92□□□□□ -1.62
CHD8Q9HCK8 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC4.92□□□□□ -1.62
CHD8Q9HCK8 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CHD8Q9HCK8 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC4.92□□□□□ -1.62
CHD8Q9HCK8 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
CHD8Q9HCK8 AL732292.1-201ENST00000426692 226 ntBASIC4.92□□□□□ -1.62
CHD8Q9HCK8 TXNP5-201ENST00000441043 315 ntBASIC4.92□□□□□ -1.62
CHD8Q9HCK8 Z95152.1-201ENST00000453556 656 ntBASIC4.92□□□□□ -1.62
CHD8Q9HCK8 RPL23AP2-201ENST00000471227 466 ntBASIC4.92□□□□□ -1.62
CHD8Q9HCK8 AC093840.1-201ENST00000511599 336 ntBASIC4.92□□□□□ -1.62
CHD8Q9HCK8 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.92□□□□□ -1.62
CHD8Q9HCK8 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CHD8Q9HCK8 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 OR2B7P-201ENST00000429302 934 ntBASIC4.91□□□□□ -1.62
CHD8Q9HCK8 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 RN7SKP253-201ENST00000516424 309 ntBASIC4.91□□□□□ -1.62
CHD8Q9HCK8 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 MTCO1P49-201ENST00000523429 802 ntBASIC4.91□□□□□ -1.62
CHD8Q9HCK8 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 KPNA2P3-201ENST00000584190 848 ntBASIC4.91□□□□□ -1.62
CHD8Q9HCK8 AC116631.1-202ENST00000640984 683 ntBASIC4.91□□□□□ -1.62
CHD8Q9HCK8 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 RNU1-94P-201ENST00000362627 173 ntBASIC4.91□□□□□ -1.62
CHD8Q9HCK8 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 AP005119.2-201ENST00000579735 1105 ntBASIC4.91□□□□□ -1.62
CHD8Q9HCK8 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 MEMO1P5-201ENST00000604810 406 ntBASIC4.91□□□□□ -1.62
CHD8Q9HCK8 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.91□□□□□ -1.62
CHD8Q9HCK8 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CHD8Q9HCK8 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CHD8Q9HCK8 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CHD8Q9HCK8 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CHD8Q9HCK8 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
CHD8Q9HCK8 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC4.9□□□□□ -1.62
CHD8Q9HCK8 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.9□□□□□ -1.62
CHD8Q9HCK8 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC4.9□□□□□ -1.62
CHD8Q9HCK8 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CHD8Q9HCK8 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.9□□□□□ -1.62
CHD8Q9HCK8 Z92545.1-201ENST00000411782 234 ntBASIC4.9□□□□□ -1.62
CHD8Q9HCK8 AC073465.2-201ENST00000440938 498 ntBASIC4.9□□□□□ -1.62
CHD8Q9HCK8 MTND2P28-201ENST00000457540 1044 ntBASIC4.9□□□□□ -1.62
CHD8Q9HCK8 AC068831.4-201ENST00000556118 109 ntBASIC4.9□□□□□ -1.62
CHD8Q9HCK8 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.9□□□□□ -1.62
CHD8Q9HCK8 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.9□□□□□ -1.62
CHD8Q9HCK8 NANOGP3-201ENST00000605855 286 ntBASIC4.9□□□□□ -1.62
CHD8Q9HCK8 AC092692.1-201ENST00000623625 2595 ntBASIC4.9□□□□□ -1.62
CHD8Q9HCK8 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
CHD8Q9HCK8 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CHD8Q9HCK8 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC4.9□□□□□ -1.63
CHD8Q9HCK8 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CHD8Q9HCK8 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
CHD8Q9HCK8 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
CHD8Q9HCK8 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CHD8Q9HCK8 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CHD8Q9HCK8 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CHD8Q9HCK8 GAPDHP49-201ENST00000421421 961 ntBASIC4.9□□□□□ -1.63
CHD8Q9HCK8 AL451063.1-201ENST00000450164 1133 ntBASIC4.9□□□□□ -1.63
CHD8Q9HCK8 MEMO1P4-201ENST00000453590 386 ntBASIC4.9□□□□□ -1.63
CHD8Q9HCK8 AC108751.3-201ENST00000461814 1020 ntBASIC4.9□□□□□ -1.63
CHD8Q9HCK8 Y_RNA.673-201ENST00000516306 88 ntBASIC4.9□□□□□ -1.63
CHD8Q9HCK8 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms