Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC074101.1-201ENST00000637861 241 ntBASIC4.07□□□□□ -1.76
VPS13CQ709C8 TNFRSF9-204ENST00000615230 5970 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
VPS13CQ709C8 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
VPS13CQ709C8 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
VPS13CQ709C8 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS13CQ709C8 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS13CQ709C8 USP3-201ENST00000268049 5311 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS13CQ709C8 OR8V1P-201ENST00000395193 873 ntBASIC4.07□□□□□ -1.76
VPS13CQ709C8 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VPS13CQ709C8 RPL19P16-201ENST00000433839 588 ntBASIC4.07□□□□□ -1.76
VPS13CQ709C8 RPS5P7-201ENST00000456664 608 ntBASIC4.07□□□□□ -1.76
VPS13CQ709C8 SNORD125-201ENST00000459538 96 ntBASIC4.07□□□□□ -1.76
VPS13CQ709C8 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC4.07□□□□□ -1.76
VPS13CQ709C8 AL445567.2-201ENST00000618935 498 ntBASIC4.07□□□□□ -1.76
VPS13CQ709C8 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS13CQ709C8 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VPS13CQ709C8 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS13CQ709C8 SASH1-204ENST00000622663 5075 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VPS13CQ709C8 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS13CQ709C8 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
VPS13CQ709C8 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS13CQ709C8 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VPS13CQ709C8 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VPS13CQ709C8 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VPS13CQ709C8 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS13CQ709C8 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
VPS13CQ709C8 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS13CQ709C8 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS13CQ709C8 FTH1P25-201ENST00000447665 469 ntBASIC4.07□□□□□ -1.76
VPS13CQ709C8 AC041039.1-201ENST00000485656 536 ntBASIC4.07□□□□□ -1.76
VPS13CQ709C8 SCARNA13-201ENST00000516672 275 ntBASIC4.07□□□□□ -1.76
VPS13CQ709C8 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS13CQ709C8 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
VPS13CQ709C8 PAPPA2-202ENST00000367662 9691 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS13CQ709C8 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS13CQ709C8 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS13CQ709C8 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
VPS13CQ709C8 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS13CQ709C8 VCL-202ENST00000372755 6489 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS13CQ709C8 SMG1P7-201ENST00000565246 2704 ntBASIC4.06□□□□□ -1.76
VPS13CQ709C8 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS13CQ709C8 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS13CQ709C8 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS13CQ709C8 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS13CQ709C8 NCLP2-201ENST00000416078 1462 ntBASIC4.06□□□□□ -1.76
VPS13CQ709C8 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS13CQ709C8 EPHB2-204ENST00000400191 10816 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS13CQ709C8 RPL23AP59-201ENST00000399415 461 ntBASIC4.06□□□□□ -1.76
VPS13CQ709C8 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS13CQ709C8 AL353748.1-201ENST00000440753 474 ntBASIC4.06□□□□□ -1.76
VPS13CQ709C8 AC024451.1-201ENST00000508013 779 ntBASIC4.06□□□□□ -1.76
VPS13CQ709C8 VN1R85P-201ENST00000601587 426 ntBASIC4.06□□□□□ -1.76
VPS13CQ709C8 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS13CQ709C8 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS13CQ709C8 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS13CQ709C8 AC004836.1-201ENST00000623032 634 ntBASIC4.06□□□□□ -1.76
VPS13CQ709C8 IL6ST-206ENST00000381298 9057 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS13CQ709C8 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS13CQ709C8 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS13CQ709C8 AC007114.2-201ENST00000576014 4281 ntBASIC4.06□□□□□ -1.76
VPS13CQ709C8 RBPJP2-201ENST00000618187 1444 ntBASIC4.06□□□□□ -1.76
VPS13CQ709C8 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
VPS13CQ709C8 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS13CQ709C8 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS13CQ709C8 AL021331.1-201ENST00000402817 582 ntBASIC4.06□□□□□ -1.76
VPS13CQ709C8 ARL4AP5-201ENST00000404372 599 ntBASIC4.06□□□□□ -1.76
VPS13CQ709C8 CYCSP19-201ENST00000411715 316 ntBASIC4.06□□□□□ -1.76
VPS13CQ709C8 RPL36AP36-201ENST00000418616 301 ntBASIC4.06□□□□□ -1.76
VPS13CQ709C8 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS13CQ709C8 RPL21P126-201ENST00000470049 478 ntBASIC4.06□□□□□ -1.76
VPS13CQ709C8 AP002812.1-201ENST00000495378 474 ntBASIC4.06□□□□□ -1.76
VPS13CQ709C8 AC096754.1-201ENST00000508904 818 ntBASIC4.06□□□□□ -1.76
VPS13CQ709C8 HMGN1P9-201ENST00000515212 298 ntBASIC4.06□□□□□ -1.76
VPS13CQ709C8 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS13CQ709C8 AC107068.1-201ENST00000563286 4218 ntBASIC4.06□□□□□ -1.76
VPS13CQ709C8 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.06□□□□□ -1.76
VPS13CQ709C8 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS13CQ709C8 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS13CQ709C8 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
VPS13CQ709C8 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS13CQ709C8 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
VPS13CQ709C8 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS13CQ709C8 CRIP1P1-201ENST00000427567 185 ntBASIC4.06□□□□□ -1.76
VPS13CQ709C8 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS13CQ709C8 IGHV5-78-201ENST00000450948 295 ntBASIC4.06□□□□□ -1.76
VPS13CQ709C8 IGLVIV-65-201ENST00000517313 360 ntBASIC4.06□□□□□ -1.76
VPS13CQ709C8 AC106785.1-201ENST00000565935 262 ntBASIC4.06□□□□□ -1.76
VPS13CQ709C8 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS13CQ709C8 AL138960.1-201ENST00000613838 513 ntBASIC4.06□□□□□ -1.76
VPS13CQ709C8 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS13CQ709C8 AL442639.1-201ENST00000625030 1899 ntBASIC4.06□□□□□ -1.76
VPS13CQ709C8 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS13CQ709C8 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS13CQ709C8 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 AL449283.1-201ENST00000602631 3403 ntBASIC4.05□□□□□ -1.76
VPS13CQ709C8 RNA5SP428-201ENST00000365129 132 ntBASIC4.05□□□□□ -1.76
VPS13CQ709C8 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.05□□□□□ -1.76
VPS13CQ709C8 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms