Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC3.57□□□□□ -1.84
PRKDCP78527 VPS8-227ENST00000625842 4969 ntAPPRIS P4 TSL 5 BASIC3.57□□□□□ -1.84
PRKDCP78527 RNA5-8SP5-201ENST00000365304 152 ntBASIC3.57□□□□□ -1.84
PRKDCP78527 NRBF2P3-201ENST00000432731 865 ntBASIC3.57□□□□□ -1.84
PRKDCP78527 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.57□□□□□ -1.84
PRKDCP78527 AC011742.2-201ENST00000443818 352 ntBASIC3.57□□□□□ -1.84
PRKDCP78527 AC092754.1-201ENST00000472975 479 ntBASIC3.57□□□□□ -1.84
PRKDCP78527 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.57□□□□□ -1.84
PRKDCP78527 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC3.57□□□□□ -1.84
PRKDCP78527 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.57□□□□□ -1.84
PRKDCP78527 AC244107.2-201ENST00000611773 76 ntBASIC3.57□□□□□ -1.84
PRKDCP78527 NEK3-211ENST00000629912 141 ntTSL 5 BASIC3.57□□□□□ -1.84
PRKDCP78527 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PRKDCP78527 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
PRKDCP78527 TRANK1-201ENST00000429976 10481 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
PRKDCP78527 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PRKDCP78527 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PRKDCP78527 UGT2B26P-201ENST00000508672 1613 ntBASIC3.57□□□□□ -1.84
PRKDCP78527 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC3.56□□□□□ -1.84
PRKDCP78527 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.56□□□□□ -1.84
PRKDCP78527 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC3.56□□□□□ -1.84
PRKDCP78527 AC108064.1-201ENST00000513791 460 ntBASIC3.56□□□□□ -1.84
PRKDCP78527 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
PRKDCP78527 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC3.56□□□□□ -1.84
PRKDCP78527 AL356863.1-201ENST00000623378 1080 ntBASIC3.56□□□□□ -1.84
PRKDCP78527 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PRKDCP78527 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PRKDCP78527 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PRKDCP78527 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PRKDCP78527 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PRKDCP78527 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC3.56□□□□□ -1.84
PRKDCP78527 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PRKDCP78527 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PRKDCP78527 SNORA66-201ENST00000384792 133 ntBASIC3.56□□□□□ -1.84
PRKDCP78527 RPL23AP26-201ENST00000412728 464 ntBASIC3.56□□□□□ -1.84
PRKDCP78527 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.56□□□□□ -1.84
PRKDCP78527 RNGTTP1-201ENST00000420965 728 ntBASIC3.56□□□□□ -1.84
PRKDCP78527 ARL4AP4-201ENST00000434170 518 ntBASIC3.56□□□□□ -1.84
PRKDCP78527 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.56□□□□□ -1.84
PRKDCP78527 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.56□□□□□ -1.84
PRKDCP78527 AC098976.1-201ENST00000513014 541 ntBASIC3.56□□□□□ -1.84
PRKDCP78527 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
PRKDCP78527 AC067852.5-201ENST00000589299 310 ntBASIC3.56□□□□□ -1.84
PRKDCP78527 AL160281.1-201ENST00000605307 311 ntBASIC3.56□□□□□ -1.84
PRKDCP78527 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.56□□□□□ -1.84
PRKDCP78527 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
PRKDCP78527 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.56□□□□□ -1.84
PRKDCP78527 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
PRKDCP78527 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PRKDCP78527 SALL4P2-201ENST00000423288 2910 ntBASIC3.56□□□□□ -1.84
PRKDCP78527 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
PRKDCP78527 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
PRKDCP78527 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
PRKDCP78527 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PRKDCP78527 ALB-220ENST00000621628 1606 ntTSL 5 BASIC3.56□□□□□ -1.84
PRKDCP78527 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PRKDCP78527 NDUFB4P4-201ENST00000404822 243 ntBASIC3.56□□□□□ -1.84
PRKDCP78527 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.56□□□□□ -1.84
PRKDCP78527 AC124944.2-201ENST00000429866 1242 ntBASIC3.56□□□□□ -1.84
PRKDCP78527 MTCO1P54-201ENST00000430139 712 ntBASIC3.56□□□□□ -1.84
PRKDCP78527 RPS29P17-201ENST00000430795 166 ntBASIC3.56□□□□□ -1.84
PRKDCP78527 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.56□□□□□ -1.84
PRKDCP78527 ARL6IP1P3-201ENST00000524544 560 ntBASIC3.56□□□□□ -1.84
PRKDCP78527 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.56□□□□□ -1.84
PRKDCP78527 MIR4420-201ENST00000583944 77 ntBASIC3.56□□□□□ -1.84
PRKDCP78527 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PRKDCP78527 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.56□□□□□ -1.84
PRKDCP78527 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC3.56□□□□□ -1.84
PRKDCP78527 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
PRKDCP78527 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PRKDCP78527 SIM1-202ENST00000369208 8430 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PRKDCP78527 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.56□□□□□ -1.84
PRKDCP78527 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PRKDCP78527 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
PRKDCP78527 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC3.55□□□□□ -1.84
PRKDCP78527 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PRKDCP78527 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PRKDCP78527 AL121977.1-201ENST00000401636 979 ntBASIC3.55□□□□□ -1.84
PRKDCP78527 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.55□□□□□ -1.84
PRKDCP78527 AL356095.1-201ENST00000417217 199 ntBASIC3.55□□□□□ -1.84
PRKDCP78527 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.55□□□□□ -1.84
PRKDCP78527 OR7E125P-201ENST00000443450 846 ntBASIC3.55□□□□□ -1.84
PRKDCP78527 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC3.55□□□□□ -1.84
PRKDCP78527 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC3.55□□□□□ -1.84
PRKDCP78527 RPL7P40-201ENST00000481703 745 ntBASIC3.55□□□□□ -1.84
PRKDCP78527 OR2A3P-201ENST00000493774 953 ntBASIC3.55□□□□□ -1.84
PRKDCP78527 HNRNPCP4-201ENST00000571636 900 ntBASIC3.55□□□□□ -1.84
PRKDCP78527 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PRKDCP78527 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PRKDCP78527 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC3.55□□□□□ -1.84
PRKDCP78527 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC3.55□□□□□ -1.84
PRKDCP78527 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC3.55□□□□□ -1.84
PRKDCP78527 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC3.55□□□□□ -1.84
PRKDCP78527 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PRKDCP78527 MED12-201ENST00000333646 6977 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
PRKDCP78527 FBN2-208ENST00000619499 10154 ntTSL 5 BASIC3.55□□□□□ -1.84
PRKDCP78527 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PRKDCP78527 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PRKDCP78527 RNA5SP119-201ENST00000362715 117 ntBASIC3.55□□□□□ -1.84
PRKDCP78527 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms