Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
YBX1P67809 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC6.33□□□□□ -1.4
YBX1P67809 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
YBX1P67809 MIR212-201ENST00000586026 110 ntBASIC6.33□□□□□ -1.4
YBX1P67809 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.33□□□□□ -1.4
YBX1P67809 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.33□□□□□ -1.4
YBX1P67809 U73023.1-201ENST00000603134 700 ntBASIC6.33□□□□□ -1.4
YBX1P67809 AP004372.1-201ENST00000604842 844 ntBASIC6.33□□□□□ -1.4
YBX1P67809 AC114477.1-201ENST00000605097 605 ntBASIC6.33□□□□□ -1.4
YBX1P67809 AC128687.1-201ENST00000605304 619 ntBASIC6.33□□□□□ -1.4
YBX1P67809 AC006270.3-201ENST00000605967 1036 ntBASIC6.33□□□□□ -1.4
YBX1P67809 AC079395.2-201ENST00000610982 737 ntBASIC6.33□□□□□ -1.4
YBX1P67809 DLEU2_1.1-201ENST00000612089 120 ntBASIC6.33□□□□□ -1.4
YBX1P67809 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.33□□□□□ -1.4
YBX1P67809 DLEU2_1.2-201ENST00000614667 120 ntBASIC6.33□□□□□ -1.4
YBX1P67809 AC026368.1-201ENST00000614934 690 ntBASIC6.33□□□□□ -1.4
YBX1P67809 MIR6823-201ENST00000622118 61 ntBASIC6.33□□□□□ -1.4
YBX1P67809 AC114546.4-201ENST00000624413 369 ntBASIC6.33□□□□□ -1.4
YBX1P67809 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.33□□□□□ -1.4
YBX1P67809 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
YBX1P67809 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.33□□□□□ -1.4
YBX1P67809 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
YBX1P67809 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.33□□□□□ -1.4
YBX1P67809 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
YBX1P67809 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.33□□□□□ -1.4
YBX1P67809 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
YBX1P67809 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.33□□□□□ -1.4
YBX1P67809 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
YBX1P67809 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
YBX1P67809 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.33□□□□□ -1.4
YBX1P67809 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
YBX1P67809 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
YBX1P67809 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
YBX1P67809 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.33□□□□□ -1.4
YBX1P67809 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
YBX1P67809 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
YBX1P67809 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
YBX1P67809 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.32□□□□□ -1.4
YBX1P67809 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
YBX1P67809 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC6.32□□□□□ -1.4
YBX1P67809 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.32□□□□□ -1.4
YBX1P67809 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
YBX1P67809 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
YBX1P67809 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.32□□□□□ -1.4
YBX1P67809 AC006213.6-201ENST00000623722 4179 ntBASIC6.32□□□□□ -1.4
YBX1P67809 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
YBX1P67809 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
YBX1P67809 MTCO1P28-201ENST00000574177 1528 ntBASIC6.32□□□□□ -1.4
YBX1P67809 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
YBX1P67809 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.32□□□□□ -1.4
YBX1P67809 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.32□□□□□ -1.4
YBX1P67809 RNU6-797P-201ENST00000363101 109 ntBASIC6.32□□□□□ -1.4
YBX1P67809 SNORD94-201ENST00000386037 137 ntBASIC6.32□□□□□ -1.4
YBX1P67809 AC092642.1-201ENST00000392417 425 ntBASIC6.32□□□□□ -1.4
YBX1P67809 RNU6-920P-201ENST00000410926 92 ntBASIC6.32□□□□□ -1.4
YBX1P67809 RN7SKP142-201ENST00000411236 328 ntBASIC6.32□□□□□ -1.4
YBX1P67809 RANP6-201ENST00000413691 644 ntBASIC6.32□□□□□ -1.4
YBX1P67809 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
YBX1P67809 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.32□□□□□ -1.4
YBX1P67809 MGAT2P2-201ENST00000427194 797 ntBASIC6.32□□□□□ -1.4
YBX1P67809 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC6.32□□□□□ -1.4
YBX1P67809 NDUFS5P5-201ENST00000437256 321 ntBASIC6.32□□□□□ -1.4
YBX1P67809 TVP23CP1-201ENST00000450317 639 ntBASIC6.32□□□□□ -1.4
YBX1P67809 GTF2IP12-201ENST00000456547 356 ntBASIC6.32□□□□□ -1.4
YBX1P67809 AC104763.1-201ENST00000475274 360 ntBASIC6.32□□□□□ -1.4
YBX1P67809 HPRT1P2-201ENST00000505250 544 ntBASIC6.32□□□□□ -1.4
YBX1P67809 ST13P12-201ENST00000508958 1094 ntBASIC6.32□□□□□ -1.4
YBX1P67809 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.32□□□□□ -1.4
YBX1P67809 AC026782.2-201ENST00000510845 636 ntBASIC6.32□□□□□ -1.4
YBX1P67809 SCARNA5-201ENST00000516201 276 ntBASIC6.32□□□□□ -1.4
YBX1P67809 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
YBX1P67809 AP001000.1-201ENST00000526843 742 ntBASIC6.32□□□□□ -1.4
YBX1P67809 GTF2IP11-201ENST00000526931 420 ntBASIC6.32□□□□□ -1.4
YBX1P67809 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC6.32□□□□□ -1.4
YBX1P67809 AL121579.2-201ENST00000555466 590 ntBASIC6.32□□□□□ -1.4
YBX1P67809 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.32□□□□□ -1.4
YBX1P67809 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC6.32□□□□□ -1.4
YBX1P67809 MIR4999-201ENST00000585029 91 ntBASIC6.32□□□□□ -1.4
YBX1P67809 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.32□□□□□ -1.4
YBX1P67809 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.32□□□□□ -1.4
YBX1P67809 AC025253.1-201ENST00000613623 543 ntBASIC6.32□□□□□ -1.4
YBX1P67809 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
YBX1P67809 FRG1HP-204ENST00000617940 757 ntBASIC6.32□□□□□ -1.4
YBX1P67809 AC139769.3-201ENST00000618383 175 ntBASIC6.32□□□□□ -1.4
YBX1P67809 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.32□□□□□ -1.4
YBX1P67809 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.32□□□□□ -1.4
YBX1P67809 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
YBX1P67809 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.32□□□□□ -1.4
YBX1P67809 CASC19-264ENST00000641912 1184 ntBASIC6.32□□□□□ -1.4
YBX1P67809 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
YBX1P67809 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
YBX1P67809 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.32□□□□□ -1.4
YBX1P67809 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
YBX1P67809 AL662795.2-201ENST00000624252 3706 ntBASIC6.32□□□□□ -1.4
YBX1P67809 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.32□□□□□ -1.4
YBX1P67809 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.32□□□□□ -1.4
YBX1P67809 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
YBX1P67809 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
YBX1P67809 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
YBX1P67809 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms