Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CLRN1P58418 AC022507.1-201ENST00000548349 1505 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 AC090181.3-201ENST00000624777 1514 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLRN1P58418 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLRN1P58418 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.62□□□□□ -1.51
CLRN1P58418 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.62□□□□□ -1.51
CLRN1P58418 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLRN1P58418 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.62□□□□□ -1.51
CLRN1P58418 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLRN1P58418 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CLRN1P58418 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLRN1P58418 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLRN1P58418 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLRN1P58418 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLRN1P58418 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLRN1P58418 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.61□□□□□ -1.51
CLRN1P58418 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CLRN1P58418 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLRN1P58418 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLRN1P58418 RNU4-31P-201ENST00000384211 141 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 VIM2P-201ENST00000402383 1294 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CLRN1P58418 AL451046.1-201ENST00000406097 534 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.61□□□□□ -1.51
CLRN1P58418 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.61□□□□□ -1.51
CLRN1P58418 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.61□□□□□ -1.51
CLRN1P58418 USP9YP14-201ENST00000430663 563 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.61□□□□□ -1.51
CLRN1P58418 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.61□□□□□ -1.51
CLRN1P58418 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.61□□□□□ -1.51
CLRN1P58418 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLRN1P58418 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC5.61□□□□□ -1.51
CLRN1P58418 ISCA1P2-201ENST00000438679 421 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 RPSAP40-201ENST00000442343 891 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 AC245291.3-201ENST00000443400 292 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLRN1P58418 AL022237.1-201ENST00000446663 358 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 COX4I1P2-201ENST00000447446 547 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 MTCO3P16-201ENST00000454456 754 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 AC103563.5-201ENST00000455643 364 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 RN7SL643P-201ENST00000471845 291 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 RN7SL369P-201ENST00000477138 299 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLRN1P58418 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.61□□□□□ -1.51
CLRN1P58418 GM2AP2-201ENST00000491764 562 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLRN1P58418 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.61□□□□□ -1.51
CLRN1P58418 AC093816.1-201ENST00000515076 913 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 PRELID3BP4-201ENST00000515476 571 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 IGHV3-63-201ENST00000518422 341 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 IGHV4-55-201ENST00000520889 368 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 CYCSP25-201ENST00000525280 316 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.61□□□□□ -1.51
CLRN1P58418 ELOCP32-201ENST00000548625 324 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 AC023161.2-201ENST00000551218 780 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 NBEAP1-201ENST00000554452 979 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 AADACP1-206ENST00000561502 1193 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 OR4H6P-201ENST00000563771 921 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.61□□□□□ -1.51
CLRN1P58418 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.61□□□□□ -1.51
CLRN1P58418 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.61□□□□□ -1.51
CLRN1P58418 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLRN1P58418 AC005332.4-201ENST00000592752 579 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.61□□□□□ -1.51
CLRN1P58418 AL589863.1-201ENST00000595383 631 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 AL136984.1-201ENST00000607611 1893 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLRN1P58418 MIR6885-201ENST00000612241 66 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 AC107075.1-201ENST00000613695 314 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 AC105227.2-201ENST00000615075 605 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 AC005899.7-201ENST00000618199 588 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 VN1R7P-201ENST00000619242 903 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLRN1P58418 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.61□□□□□ -1.51
CLRN1P58418 AC079248.2-201ENST00000623779 326 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 AP003497.2-201ENST00000624220 967 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLRN1P58418 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.61□□□□□ -1.51
CLRN1P58418 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.61□□□□□ -1.51
CLRN1P58418 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.61□□□□□ -1.51
CLRN1P58418 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CLRN1P58418 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CLRN1P58418 OR7E91P-202ENST00000642062 1198 ntBASIC5.61□□□□□ -1.51
CLRN1P58418 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLRN1P58418 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLRN1P58418 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLRN1P58418 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLRN1P58418 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CLRN1P58418 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLRN1P58418 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLRN1P58418 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLRN1P58418 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC5.6□□□□□ -1.51
CLRN1P58418 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.6□□□□□ -1.51
CLRN1P58418 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CLRN1P58418 AC000367.1-201ENST00000452711 1766 ntBASIC5.6□□□□□ -1.51
CLRN1P58418 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLRN1P58418 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.6□□□□□ -1.51
CLRN1P58418 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLRN1P58418 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms