Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 CAB39P1-201ENST00000502277 460 ntBASIC4.66□□□□□ -1.66
NKX2-1P43699 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC4.66□□□□□ -1.66
NKX2-1P43699 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.66□□□□□ -1.66
NKX2-1P43699 CR383658.1-201ENST00000514609 734 ntBASIC4.66□□□□□ -1.66
NKX2-1P43699 AC020937.1-201ENST00000519677 1013 ntBASIC4.66□□□□□ -1.66
NKX2-1P43699 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.66□□□□□ -1.66
NKX2-1P43699 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.66□□□□□ -1.66
NKX2-1P43699 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NKX2-1P43699 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.66□□□□□ -1.66
NKX2-1P43699 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.66□□□□□ -1.66
NKX2-1P43699 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC4.66□□□□□ -1.66
NKX2-1P43699 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.66□□□□□ -1.66
NKX2-1P43699 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.66□□□□□ -1.66
NKX2-1P43699 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NKX2-1P43699 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NKX2-1P43699 MIR4675-201ENST00000577898 77 ntBASIC4.66□□□□□ -1.66
NKX2-1P43699 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
NKX2-1P43699 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC4.66□□□□□ -1.66
NKX2-1P43699 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.66□□□□□ -1.66
NKX2-1P43699 COX6CP7-201ENST00000597056 208 ntBASIC4.66□□□□□ -1.66
NKX2-1P43699 BNIP3P31-201ENST00000604515 566 ntBASIC4.66□□□□□ -1.66
NKX2-1P43699 AC011891.2-201ENST00000604949 397 ntBASIC4.66□□□□□ -1.66
NKX2-1P43699 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.66□□□□□ -1.66
NKX2-1P43699 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC4.66□□□□□ -1.66
NKX2-1P43699 AC089999.3-201ENST00000622440 577 ntBASIC4.66□□□□□ -1.66
NKX2-1P43699 AL138955.1-201ENST00000622881 1040 ntBASIC4.66□□□□□ -1.66
NKX2-1P43699 AC007683.2-201ENST00000624681 714 ntBASIC4.66□□□□□ -1.66
NKX2-1P43699 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.66□□□□□ -1.66
NKX2-1P43699 AC007603.3-201ENST00000636915 979 ntBASIC4.66□□□□□ -1.66
NKX2-1P43699 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NKX2-1P43699 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.66□□□□□ -1.66
NKX2-1P43699 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.66□□□□□ -1.66
NKX2-1P43699 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NKX2-1P43699 LINC01613-201ENST00000561476 2780 ntBASIC4.66□□□□□ -1.66
NKX2-1P43699 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NKX2-1P43699 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NKX2-1P43699 MTND4P9-201ENST00000507819 1346 ntBASIC4.66□□□□□ -1.66
NKX2-1P43699 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
NKX2-1P43699 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NKX2-1P43699 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NKX2-1P43699 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
NKX2-1P43699 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NKX2-1P43699 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NKX2-1P43699 NEPNP-201ENST00000404786 1371 ntBASIC4.65□□□□□ -1.66
NKX2-1P43699 AC079097.1-201ENST00000512187 1399 ntBASIC4.65□□□□□ -1.66
NKX2-1P43699 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NKX2-1P43699 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NKX2-1P43699 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
NKX2-1P43699 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NKX2-1P43699 AC093775.1-201ENST00000624154 1868 ntBASIC4.65□□□□□ -1.66
NKX2-1P43699 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
NKX2-1P43699 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC4.65□□□□□ -1.66
NKX2-1P43699 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.65□□□□□ -1.66
NKX2-1P43699 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NKX2-1P43699 NXF4-202ENST00000416098 1465 ntBASIC4.65□□□□□ -1.66
NKX2-1P43699 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.65□□□□□ -1.66
NKX2-1P43699 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.65□□□□□ -1.67
NKX2-1P43699 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
NKX2-1P43699 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
NKX2-1P43699 SNORA63.3-201ENST00000362682 132 ntBASIC4.65□□□□□ -1.67
NKX2-1P43699 RNU1-134P-201ENST00000362935 165 ntBASIC4.65□□□□□ -1.67
NKX2-1P43699 RNU6-249P-201ENST00000363016 102 ntBASIC4.65□□□□□ -1.67
NKX2-1P43699 RNU6-666P-201ENST00000363499 107 ntBASIC4.65□□□□□ -1.67
NKX2-1P43699 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
NKX2-1P43699 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NKX2-1P43699 AL139805.1-201ENST00000407837 289 ntBASIC4.65□□□□□ -1.67
NKX2-1P43699 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC4.65□□□□□ -1.67
NKX2-1P43699 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.65□□□□□ -1.67
NKX2-1P43699 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NKX2-1P43699 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
NKX2-1P43699 GAS5-202ENST00000414075 413 ntTSL 2 BASIC4.65□□□□□ -1.67
NKX2-1P43699 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
NKX2-1P43699 RNF10P1-201ENST00000418589 369 ntBASIC4.65□□□□□ -1.67
NKX2-1P43699 Z82198.3-201ENST00000421145 199 ntBASIC4.65□□□□□ -1.67
NKX2-1P43699 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC4.65□□□□□ -1.67
NKX2-1P43699 AC130360.1-201ENST00000425489 1117 ntBASIC4.65□□□□□ -1.67
NKX2-1P43699 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC4.65□□□□□ -1.67
NKX2-1P43699 CYCSP11-201ENST00000436426 315 ntBASIC4.65□□□□□ -1.67
NKX2-1P43699 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
NKX2-1P43699 AC092601.1-201ENST00000444526 383 ntBASIC4.65□□□□□ -1.67
NKX2-1P43699 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC4.65□□□□□ -1.67
NKX2-1P43699 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.65□□□□□ -1.67
NKX2-1P43699 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.65□□□□□ -1.67
NKX2-1P43699 HMGB1P5-202ENST00000451497 985 ntBASIC4.65□□□□□ -1.67
NKX2-1P43699 CLIC4P1-201ENST00000453177 535 ntBASIC4.65□□□□□ -1.67
NKX2-1P43699 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.65□□□□□ -1.67
NKX2-1P43699 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.65□□□□□ -1.67
NKX2-1P43699 RPS23P2-201ENST00000463671 415 ntBASIC4.65□□□□□ -1.67
NKX2-1P43699 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NKX2-1P43699 ATP5LP5-201ENST00000483050 299 ntBASIC4.65□□□□□ -1.67
NKX2-1P43699 CDH12P2-201ENST00000504393 298 ntBASIC4.65□□□□□ -1.67
NKX2-1P43699 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.65□□□□□ -1.67
NKX2-1P43699 MRPS5P3-201ENST00000515577 166 ntBASIC4.65□□□□□ -1.67
NKX2-1P43699 SEPT10P1-201ENST00000517342 1162 ntBASIC4.65□□□□□ -1.67
NKX2-1P43699 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC4.65□□□□□ -1.67
NKX2-1P43699 AC130365.2-201ENST00000525882 1201 ntBASIC4.65□□□□□ -1.67
NKX2-1P43699 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.65□□□□□ -1.67
NKX2-1P43699 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC4.65□□□□□ -1.67
NKX2-1P43699 AC139697.1-201ENST00000548429 745 ntBASIC4.65□□□□□ -1.67
NKX2-1P43699 AC068305.2-201ENST00000550567 1205 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms