Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC073143.1-201ENST00000436316 395 ntBASIC3.11□□□□□ -1.91
APOBP04114 AC114755.5-201ENST00000447760 831 ntBASIC3.11□□□□□ -1.91
APOBP04114 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC3.11□□□□□ -1.91
APOBP04114 PRSS3P4-201ENST00000453323 162 ntBASIC3.11□□□□□ -1.91
APOBP04114 RN7SL441P-201ENST00000492388 296 ntBASIC3.11□□□□□ -1.91
APOBP04114 AC098976.1-201ENST00000513014 541 ntBASIC3.11□□□□□ -1.91
APOBP04114 RN7SKP260-201ENST00000516907 149 ntBASIC3.11□□□□□ -1.91
APOBP04114 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.11□□□□□ -1.91
APOBP04114 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC3.11□□□□□ -1.91
APOBP04114 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC3.11□□□□□ -1.91
APOBP04114 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
APOBP04114 AC068769.1-201ENST00000474767 2426 ntBASIC3.11□□□□□ -1.91
APOBP04114 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
APOBP04114 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
APOBP04114 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
APOBP04114 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
APOBP04114 RN7SL542P-201ENST00000467147 294 ntBASIC3.1□□□□□ -1.91
APOBP04114 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.1□□□□□ -1.91
APOBP04114 VN1R85P-201ENST00000601587 426 ntBASIC3.1□□□□□ -1.91
APOBP04114 AC108738.1-201ENST00000603703 237 ntBASIC3.1□□□□□ -1.91
APOBP04114 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC3.1□□□□□ -1.91
APOBP04114 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
APOBP04114 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC3.1□□□□□ -1.91
APOBP04114 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
APOBP04114 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
APOBP04114 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
APOBP04114 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
APOBP04114 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
APOBP04114 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC3.1□□□□□ -1.91
APOBP04114 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
APOBP04114 SNORD46.1-201ENST00000364139 104 ntBASIC3.1□□□□□ -1.91
APOBP04114 AP001324.1-201ENST00000428553 399 ntBASIC3.1□□□□□ -1.91
APOBP04114 RPL34P6-201ENST00000432390 345 ntBASIC3.1□□□□□ -1.91
APOBP04114 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.1□□□□□ -1.91
APOBP04114 IGLVIV-65-201ENST00000517313 360 ntBASIC3.1□□□□□ -1.91
APOBP04114 OR8A2P-201ENST00000528631 952 ntBASIC3.1□□□□□ -1.91
APOBP04114 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC3.1□□□□□ -1.91
APOBP04114 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC3.1□□□□□ -1.91
APOBP04114 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
APOBP04114 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
APOBP04114 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
APOBP04114 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
APOBP04114 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
APOBP04114 OR8V1P-201ENST00000395193 873 ntBASIC3.1□□□□□ -1.91
APOBP04114 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.1□□□□□ -1.91
APOBP04114 MRPS21P2-201ENST00000424704 264 ntBASIC3.1□□□□□ -1.91
APOBP04114 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.1□□□□□ -1.91
APOBP04114 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC3.1□□□□□ -1.91
APOBP04114 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.1□□□□□ -1.91
APOBP04114 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC3.1□□□□□ -1.91
APOBP04114 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.1□□□□□ -1.91
APOBP04114 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC3.1□□□□□ -1.91
APOBP04114 MIR4298-201ENST00000584380 73 ntBASIC3.1□□□□□ -1.91
APOBP04114 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.1□□□□□ -1.91
APOBP04114 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
APOBP04114 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC3.1□□□□□ -1.91
APOBP04114 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC3.1□□□□□ -1.91
APOBP04114 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
APOBP04114 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
APOBP04114 NCLP2-201ENST00000416078 1462 ntBASIC3.1□□□□□ -1.91
APOBP04114 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
APOBP04114 AP000547.3-204ENST00000588548 2523 ntBASIC3.1□□□□□ -1.91
APOBP04114 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
APOBP04114 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
APOBP04114 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
APOBP04114 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
APOBP04114 OR4K17-201ENST00000315543 1032 ntBASIC3.1□□□□□ -1.91
APOBP04114 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
APOBP04114 CYCSP19-201ENST00000411715 316 ntBASIC3.1□□□□□ -1.91
APOBP04114 RPS17P17-201ENST00000419392 409 ntBASIC3.1□□□□□ -1.91
APOBP04114 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.1□□□□□ -1.91
APOBP04114 AC016831.4-201ENST00000438302 307 ntBASIC3.1□□□□□ -1.91
APOBP04114 AC092754.1-201ENST00000472975 479 ntBASIC3.1□□□□□ -1.91
APOBP04114 AC096754.1-201ENST00000508904 818 ntBASIC3.1□□□□□ -1.91
APOBP04114 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.1□□□□□ -1.91
APOBP04114 PMS2P3-207ENST00000529061 717 ntBASIC3.1□□□□□ -1.91
APOBP04114 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.1□□□□□ -1.91
APOBP04114 AC025884.1-201ENST00000556034 378 ntBASIC3.1□□□□□ -1.91
APOBP04114 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.1□□□□□ -1.91
APOBP04114 AC060780.2-201ENST00000589047 198 ntBASIC3.1□□□□□ -1.91
APOBP04114 AC100847.1-201ENST00000611316 481 ntBASIC3.1□□□□□ -1.91
APOBP04114 AC010632.3-201ENST00000611377 369 ntBASIC3.1□□□□□ -1.91
APOBP04114 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.1□□□□□ -1.91
APOBP04114 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.1□□□□□ -1.91
APOBP04114 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
APOBP04114 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC3.1□□□□□ -1.91
APOBP04114 SMG1P7-201ENST00000565246 2704 ntBASIC3.1□□□□□ -1.91
APOBP04114 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
APOBP04114 U3.10-201ENST00000364459 214 ntBASIC3.09□□□□□ -1.91
APOBP04114 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.09□□□□□ -1.91
APOBP04114 AL137845.2-201ENST00000444292 988 ntBASIC3.09□□□□□ -1.91
APOBP04114 CYCSP34-201ENST00000458172 304 ntBASIC3.09□□□□□ -1.91
APOBP04114 RPL23AP24-201ENST00000458203 385 ntBASIC3.09□□□□□ -1.91
APOBP04114 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.09□□□□□ -1.91
APOBP04114 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC3.09□□□□□ -1.91
APOBP04114 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC3.09□□□□□ -1.91
APOBP04114 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC3.09□□□□□ -1.91
APOBP04114 AL035461.2-201ENST00000619201 524 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms