Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 Z83846.1-201ENST00000446798 265 ntBASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 Z99714.1-201ENST00000450463 807 ntBASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 AC104982.1-201ENST00000478775 574 ntBASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 AC093720.1-201ENST00000505681 714 ntBASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 AP003355.1-201ENST00000518956 587 ntBASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 AC135279.1-201ENST00000543493 504 ntBASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 AC074029.2-201ENST00000551045 634 ntBASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 MIR4509-3-201ENST00000578671 94 ntBASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 MIR4509-2-201ENST00000583920 94 ntBASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 MIR6826-201ENST00000617808 98 ntBASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 MIR4509-1-201ENST00000618224 94 ntBASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 AC068620.4-201ENST00000636730 1182 ntBASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 AC005261.6-201ENST00000623072 1387 ntBASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CTDP1Q9Y5B0 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 SMG1P7-201ENST00000565246 2704 ntBASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 MIR143-201ENST00000385300 106 ntBASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 MRPL53P1-201ENST00000414323 319 ntBASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 HMGB3P24-201ENST00000433260 622 ntBASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 MTCYBP31-201ENST00000438855 1122 ntBASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 AL663074.2-201ENST00000440621 479 ntBASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 RPL7P61-201ENST00000451721 751 ntBASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 SDC4P-201ENST00000453285 601 ntBASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 RPS27AP2-201ENST00000457576 465 ntBASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 PFN1P6-201ENST00000476786 399 ntBASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 AC022215.1-201ENST00000481770 362 ntBASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 OR8G5-201ENST00000524943 1041 ntBASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 RARSP1-201ENST00000542842 1418 ntBASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 IGBP1P1-201ENST00000554337 1009 ntBASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 AC233266.2-201ENST00000567067 528 ntBASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 MIR4505-201ENST00000582238 73 ntBASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 MIR132-201ENST00000591554 101 ntBASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 AC025165.5-201ENST00000602802 578 ntBASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 RNA5SP440-201ENST00000612665 119 ntBASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 AL445670.1-201ENST00000618889 801 ntBASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 AC026422.1-201ENST00000623961 452 ntBASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 AC126544.2-201ENST00000625174 749 ntBASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.8□□□□□ -1.32
CTDP1Q9Y5B0 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms