Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 MRE11P1-201ENST00000464884 2127 ntBASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 AC107021.2-201ENST00000567714 2095 ntBASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 RNU1-150P-201ENST00000362491 162 ntBASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 RNA5SP477-201ENST00000362639 119 ntBASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 DBIP1-201ENST00000401435 260 ntBASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 AMYP1-201ENST00000440059 1023 ntBASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 DNAJB5P1-201ENST00000454004 806 ntBASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 RPL21P6-201ENST00000479171 504 ntBASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 RN7SL273P-201ENST00000481561 299 ntBASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 AC069304.1-201ENST00000491593 704 ntBASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 MTND6P2-201ENST00000512226 524 ntBASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 RNU6-615P-201ENST00000516065 106 ntBASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 RAB30-209ENST00000532548 644 ntTSL 3 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 DPPA2P4-201ENST00000563717 878 ntBASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 RN7SL356P-201ENST00000582228 248 ntBASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 AP000769.2-201ENST00000602344 396 ntBASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 AC005479.3-201ENST00000602790 431 ntBASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 AL159169.2-201ENST00000610061 1269 ntBASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 MIR6839-201ENST00000620425 113 ntBASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 AC104118.1-201ENST00000607625 1589 ntBASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTNNBIP1Q9NSA3 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 RNA5SP232-201ENST00000364144 119 ntBASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 BX323845.3-201ENST00000428215 527 ntBASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 NPM1P48-201ENST00000436002 853 ntBASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 AC005297.1-201ENST00000444765 862 ntBASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 AC012512.1-201ENST00000446594 718 ntBASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 AP000547.1-201ENST00000454360 617 ntBASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 AC008410.1-201ENST00000483777 339 ntBASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 RPL15P21-201ENST00000495592 567 ntBASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 SCARNA16.4-201ENST00000516956 187 ntBASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 AC027369.2-201ENST00000528030 440 ntBASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 AC022884.2-201ENST00000578535 580 ntBASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.34□□□□□ -1.71
CTNNBIP1Q9NSA3 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms