Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
PTP4A1Q93096 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PTP4A1Q93096 AL353597.2-202ENST00000434901 373 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.15□□□□□ -1.59
PTP4A1Q93096 AMYP1-201ENST00000440059 1023 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.15□□□□□ -1.59
PTP4A1Q93096 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTP4A1Q93096 GEMIN2P1-201ENST00000454246 752 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.15□□□□□ -1.59
PTP4A1Q93096 AC099560.2-201ENST00000457554 255 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 RPL7AP52-201ENST00000458096 790 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 SNORD125-201ENST00000459538 96 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 AC068228.1-201ENST00000461723 211 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.15□□□□□ -1.59
PTP4A1Q93096 RPS27AP16-201ENST00000492222 470 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.15□□□□□ -1.59
PTP4A1Q93096 LSM3P4-201ENST00000502948 309 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 AC138866.2-201ENST00000508650 584 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.15□□□□□ -1.59
PTP4A1Q93096 IGKV3D-25-201ENST00000519599 235 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.15□□□□□ -1.59
PTP4A1Q93096 OR10D4P-201ENST00000525892 951 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.15□□□□□ -1.59
PTP4A1Q93096 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.15□□□□□ -1.59
PTP4A1Q93096 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.15□□□□□ -1.59
PTP4A1Q93096 AL049870.4-201ENST00000555741 486 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.15□□□□□ -1.59
PTP4A1Q93096 DPRXP4-201ENST00000578053 568 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 DHFRP1-201ENST00000579682 559 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 MIR4271-201ENST00000582451 67 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 AC008507.3-201ENST00000585753 472 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.15□□□□□ -1.59
PTP4A1Q93096 AC123786.2-201ENST00000603459 275 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 BX322635.1-201ENST00000605804 496 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 AL136131.3-201ENST00000607600 188 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 MIR6809-201ENST00000612189 116 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 AC073593.1-201ENST00000624500 411 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 TMEM30CP-203ENST00000637814 1035 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTP4A1Q93096 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTP4A1Q93096 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.15□□□□□ -1.59
PTP4A1Q93096 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
PTP4A1Q93096 AL354854.1-201ENST00000455940 1363 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.15□□□□□ -1.59
PTP4A1Q93096 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PTP4A1Q93096 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
PTP4A1Q93096 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.15□□□□□ -1.59
PTP4A1Q93096 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTP4A1Q93096 LINC01963-201ENST00000562038 3148 ntBASIC5.14□□□□□ -1.59
PTP4A1Q93096 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PTP4A1Q93096 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTP4A1Q93096 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTP4A1Q93096 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PTP4A1Q93096 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTP4A1Q93096 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 RNU4-31P-201ENST00000384211 141 ntBASIC5.14□□□□□ -1.59
PTP4A1Q93096 MIR130B-202ENST00000385018 82 ntBASIC5.14□□□□□ -1.59
PTP4A1Q93096 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 CHMP1B2P-201ENST00000399581 597 ntBASIC5.14□□□□□ -1.59
PTP4A1Q93096 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 AC016739.1-201ENST00000405359 345 ntBASIC5.14□□□□□ -1.59
PTP4A1Q93096 AC048351.1-201ENST00000420064 602 ntBASIC5.14□□□□□ -1.59
PTP4A1Q93096 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 AC019205.1-201ENST00000421830 730 ntBASIC5.14□□□□□ -1.59
PTP4A1Q93096 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 MTND3P4-201ENST00000453537 303 ntBASIC5.14□□□□□ -1.59
PTP4A1Q93096 MEMO1P4-201ENST00000453590 386 ntBASIC5.14□□□□□ -1.59
PTP4A1Q93096 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 METTL15P1-201ENST00000481421 1045 ntBASIC5.14□□□□□ -1.59
PTP4A1Q93096 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 RPSAP51-201ENST00000497462 645 ntBASIC5.14□□□□□ -1.59
PTP4A1Q93096 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 AL158068.1-201ENST00000506116 616 ntBASIC5.14□□□□□ -1.59
PTP4A1Q93096 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 RNA5SP473-201ENST00000516402 125 ntBASIC5.14□□□□□ -1.59
PTP4A1Q93096 RNU6-1308P-201ENST00000516817 103 ntBASIC5.14□□□□□ -1.59
PTP4A1Q93096 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.14□□□□□ -1.59
PTP4A1Q93096 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTP4A1Q93096 AC007956.1-201ENST00000555623 542 ntBASIC5.14□□□□□ -1.59
PTP4A1Q93096 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 AC090953.1-201ENST00000604305 1092 ntBASIC5.14□□□□□ -1.59
PTP4A1Q93096 AL391834.1-201ENST00000609609 560 ntBASIC5.14□□□□□ -1.59
PTP4A1Q93096 MIR6133-201ENST00000617057 108 ntBASIC5.14□□□□□ -1.59
PTP4A1Q93096 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms