Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AL157777.1-201ENST00000468100 304 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.57□□□□□ -1.36
EPHB3P54753 AC092824.1-201ENST00000483524 576 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 RPS12P31-201ENST00000491419 398 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 AC015864.1-201ENST00000496512 544 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 NPM1P27-201ENST00000502784 830 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 AC025458.1-201ENST00000506046 166 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 FABP5P6-201ENST00000510588 409 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 RN7SKP238-201ENST00000516483 249 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC6.57□□□□□ -1.36
EPHB3P54753 HMGB1P46-201ENST00000520062 610 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC6.57□□□□□ -1.36
EPHB3P54753 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.57□□□□□ -1.36
EPHB3P54753 AP003396.4-201ENST00000527574 265 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 AP000662.1-201ENST00000530952 487 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.57□□□□□ -1.36
EPHB3P54753 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.57□□□□□ -1.36
EPHB3P54753 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.57□□□□□ -1.36
EPHB3P54753 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
EPHB3P54753 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.57□□□□□ -1.36
EPHB3P54753 PRELID3BP3-201ENST00000584963 545 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.57□□□□□ -1.36
EPHB3P54753 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.57□□□□□ -1.36
EPHB3P54753 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.57□□□□□ -1.36
EPHB3P54753 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.57□□□□□ -1.36
EPHB3P54753 AF250324.2-201ENST00000608299 610 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
EPHB3P54753 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
EPHB3P54753 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.57□□□□□ -1.36
EPHB3P54753 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
EPHB3P54753 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
EPHB3P54753 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.57□□□□□ -1.36
EPHB3P54753 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
EPHB3P54753 AL669831.5-218ENST00000591702 1873 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
EPHB3P54753 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.57□□□□□ -1.36
EPHB3P54753 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
EPHB3P54753 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
EPHB3P54753 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.57□□□□□ -1.36
EPHB3P54753 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
EPHB3P54753 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
EPHB3P54753 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
EPHB3P54753 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
EPHB3P54753 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.56□□□□□ -1.36
EPHB3P54753 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.56□□□□□ -1.36
EPHB3P54753 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
EPHB3P54753 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
EPHB3P54753 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
EPHB3P54753 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
EPHB3P54753 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
EPHB3P54753 AC022819.1-201ENST00000563495 3910 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.56□□□□□ -1.36
EPHB3P54753 CYP2G2P-201ENST00000594920 1485 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
EPHB3P54753 BX005019.1-201ENST00000561881 1810 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
EPHB3P54753 ANKRD36P1-201ENST00000344424 659 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 Z86062.1-201ENST00000406773 777 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
EPHB3P54753 FCF1P9-201ENST00000412546 282 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 RPS7P8-201ENST00000418311 581 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC6.56□□□□□ -1.36
EPHB3P54753 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC6.56□□□□□ -1.36
EPHB3P54753 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC6.56□□□□□ -1.36
EPHB3P54753 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC6.56□□□□□ -1.36
EPHB3P54753 Z99127.2-201ENST00000441426 334 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 MTND5P2-201ENST00000442927 1142 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 RPL6P5-201ENST00000445678 828 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.56□□□□□ -1.36
EPHB3P54753 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.56□□□□□ -1.36
EPHB3P54753 SUMO2P7-201ENST00000511179 285 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC6.56□□□□□ -1.36
EPHB3P54753 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.56□□□□□ -1.36
EPHB3P54753 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.56□□□□□ -1.36
EPHB3P54753 Y_RNA.710-201ENST00000516975 110 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 SEC11B-201ENST00000518383 499 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC6.56□□□□□ -1.36
EPHB3P54753 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC6.56□□□□□ -1.36
EPHB3P54753 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.56□□□□□ -1.36
EPHB3P54753 AP001858.2-201ENST00000536213 601 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC6.56□□□□□ -1.36
EPHB3P54753 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.56□□□□□ -1.36
EPHB3P54753 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
EPHB3P54753 NANOGNBP2-201ENST00000544753 553 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC6.56□□□□□ -1.36
EPHB3P54753 NOP56P3-201ENST00000549457 385 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 CCNG2P1-201ENST00000549521 1000 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 EEF1B2P4-201ENST00000551398 348 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.56□□□□□ -1.36
EPHB3P54753 AC007956.1-201ENST00000555623 542 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
EPHB3P54753 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC6.56□□□□□ -1.36
EPHB3P54753 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.56□□□□□ -1.36
EPHB3P54753 AC104229.1-201ENST00000561364 255 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 ACTR3BP3-201ENST00000565577 979 ntBASIC6.56□□□□□ -1.36
EPHB3P54753 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC6.56□□□□□ -1.36
EPHB3P54753 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.56□□□□□ -1.36
EPHB3P54753 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC6.56□□□□□ -1.36
EPHB3P54753 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.56□□□□□ -1.36
EPHB3P54753 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms