Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.86□□□□□ -1.31
PMS1P54277 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.86□□□□□ -1.31
PMS1P54277 AC139769.3-201ENST00000618383 175 ntBASIC6.86□□□□□ -1.31
PMS1P54277 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.86□□□□□ -1.31
PMS1P54277 AC084035.1-201ENST00000634543 607 ntBASIC6.86□□□□□ -1.31
PMS1P54277 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PMS1P54277 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.86□□□□□ -1.31
PMS1P54277 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.86□□□□□ -1.31
PMS1P54277 MTCO1P28-201ENST00000574177 1528 ntBASIC6.86□□□□□ -1.31
PMS1P54277 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PMS1P54277 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
PMS1P54277 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PMS1P54277 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PMS1P54277 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC6.85□□□□□ -1.31
PMS1P54277 AC217777.1-201ENST00000570034 1471 ntBASIC6.85□□□□□ -1.31
PMS1P54277 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PMS1P54277 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PMS1P54277 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
PMS1P54277 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PMS1P54277 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PMS1P54277 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PMS1P54277 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.85□□□□□ -1.31
PMS1P54277 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
PMS1P54277 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PMS1P54277 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PMS1P54277 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PMS1P54277 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.85□□□□□ -1.31
PMS1P54277 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
PMS1P54277 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PMS1P54277 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PMS1P54277 Y_RNA.77-201ENST00000362962 107 ntBASIC6.85□□□□□ -1.31
PMS1P54277 RNU1-87P-201ENST00000363727 170 ntBASIC6.85□□□□□ -1.31
PMS1P54277 RNU6-304P-201ENST00000364855 107 ntBASIC6.85□□□□□ -1.31
PMS1P54277 MIR142-201ENST00000384835 87 ntBASIC6.85□□□□□ -1.31
PMS1P54277 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
PMS1P54277 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC6.85□□□□□ -1.31
PMS1P54277 AC010385.1-201ENST00000412374 256 ntBASIC6.85□□□□□ -1.31
PMS1P54277 OR4K6P-201ENST00000416478 897 ntBASIC6.85□□□□□ -1.31
PMS1P54277 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.85□□□□□ -1.31
PMS1P54277 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.85□□□□□ -1.31
PMS1P54277 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.85□□□□□ -1.31
PMS1P54277 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.85□□□□□ -1.31
PMS1P54277 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.85□□□□□ -1.31
PMS1P54277 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC6.85□□□□□ -1.31
PMS1P54277 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.85□□□□□ -1.31
PMS1P54277 H3F3BP1-201ENST00000440551 403 ntBASIC6.85□□□□□ -1.31
PMS1P54277 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.85□□□□□ -1.31
PMS1P54277 AC007327.1-201ENST00000447461 264 ntBASIC6.85□□□□□ -1.31
PMS1P54277 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.85□□□□□ -1.31
PMS1P54277 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC6.85□□□□□ -1.31
PMS1P54277 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.85□□□□□ -1.31
PMS1P54277 AL035690.1-201ENST00000490892 383 ntBASIC6.85□□□□□ -1.31
PMS1P54277 NAA50-206ENST00000493454 964 ntTSL 2 BASIC6.85□□□□□ -1.31
PMS1P54277 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.85□□□□□ -1.31
PMS1P54277 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
PMS1P54277 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.85□□□□□ -1.31
PMS1P54277 AC113347.3-201ENST00000509113 148 ntBASIC6.85□□□□□ -1.31
PMS1P54277 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.85□□□□□ -1.31
PMS1P54277 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.85□□□□□ -1.31
PMS1P54277 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PMS1P54277 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC6.85□□□□□ -1.31
PMS1P54277 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.85□□□□□ -1.31
PMS1P54277 AC010198.2-201ENST00000550612 259 ntBASIC6.85□□□□□ -1.31
PMS1P54277 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.85□□□□□ -1.31
PMS1P54277 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.85□□□□□ -1.31
PMS1P54277 AL391156.1-201ENST00000554965 554 ntBASIC6.85□□□□□ -1.31
PMS1P54277 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
PMS1P54277 AC018558.5-201ENST00000565840 952 ntBASIC6.85□□□□□ -1.31
PMS1P54277 CYP2C60P-201ENST00000566088 139 ntBASIC6.85□□□□□ -1.31
PMS1P54277 CCDC58P1-201ENST00000578567 430 ntBASIC6.85□□□□□ -1.31
PMS1P54277 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.85□□□□□ -1.31
PMS1P54277 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.85□□□□□ -1.31
PMS1P54277 AC020916.2-201ENST00000591242 360 ntBASIC6.85□□□□□ -1.31
PMS1P54277 AC064872.1-201ENST00000604823 1072 ntBASIC6.85□□□□□ -1.31
PMS1P54277 AC245297.2-201ENST00000610119 565 ntBASIC6.85□□□□□ -1.31
PMS1P54277 AC009163.6-201ENST00000612367 342 ntBASIC6.85□□□□□ -1.31
PMS1P54277 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PMS1P54277 Z69908.1-201ENST00000622603 247 ntBASIC6.85□□□□□ -1.31
PMS1P54277 AC109454.4-201ENST00000623411 649 ntBASIC6.85□□□□□ -1.31
PMS1P54277 AC116667.2-201ENST00000641075 823 ntBASIC6.85□□□□□ -1.31
PMS1P54277 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.85□□□□□ -1.31
PMS1P54277 IMMTP1-201ENST00000435590 2219 ntBASIC6.85□□□□□ -1.31
PMS1P54277 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
PMS1P54277 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PMS1P54277 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
PMS1P54277 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.85□□□□□ -1.31
PMS1P54277 AC006042.3-201ENST00000454684 1469 ntBASIC6.85□□□□□ -1.31
PMS1P54277 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PMS1P54277 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.85□□□□□ -1.31
PMS1P54277 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PMS1P54277 SMG1P5-202ENST00000529428 4219 ntBASIC6.84□□□□□ -1.31
PMS1P54277 SMG1P2-201ENST00000566127 4221 ntBASIC6.84□□□□□ -1.31
PMS1P54277 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.84□□□□□ -1.31
PMS1P54277 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.84□□□□□ -1.31
PMS1P54277 CASC19-246ENST00000641625 1606 ntBASIC6.84□□□□□ -1.31
PMS1P54277 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PMS1P54277 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PMS1P54277 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PMS1P54277 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
PMS1P54277 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms