Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC10.17□□□□□ -0.78
CHGAP10645 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC10.17□□□□□ -0.78
CHGAP10645 AP002748.2-201ENST00000528671 348 ntBASIC10.17□□□□□ -0.78
CHGAP10645 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC10.17□□□□□ -0.78
CHGAP10645 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC10.17□□□□□ -0.78
CHGAP10645 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC10.17□□□□□ -0.78
CHGAP10645 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC10.17□□□□□ -0.78
CHGAP10645 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC10.17□□□□□ -0.78
CHGAP10645 CR382285.1-202ENST00000604687 547 ntBASIC10.17□□□□□ -0.78
CHGAP10645 MIR7109-201ENST00000613748 65 ntBASIC10.17□□□□□ -0.78
CHGAP10645 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC10.17□□□□□ -0.78
CHGAP10645 AC027807.2-201ENST00000616099 408 ntBASIC10.17□□□□□ -0.78
CHGAP10645 REV3L-214ENST00000619481 969 ntTSL 5 BASIC10.17□□□□□ -0.78
CHGAP10645 AC120349.2-201ENST00000625002 298 ntBASIC10.17□□□□□ -0.78
CHGAP10645 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CHGAP10645 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHGAP10645 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC10.17□□□□□ -0.78
CHGAP10645 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CHGAP10645 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
CHGAP10645 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC10.17□□□□□ -0.78
CHGAP10645 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHGAP10645 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHGAP10645 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
CHGAP10645 AC100871.1-201ENST00000507871 1456 ntBASIC10.17□□□□□ -0.78
CHGAP10645 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC10.16□□□□□ -0.78
CHGAP10645 IFIT1P1-201ENST00000400497 1449 ntBASIC10.16□□□□□ -0.78
CHGAP10645 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC10.16□□□□□ -0.78
CHGAP10645 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CHGAP10645 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
CHGAP10645 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CHGAP10645 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHGAP10645 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC10.16□□□□□ -0.78
CHGAP10645 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHGAP10645 LINC01358-207ENST00000634502 2575 ntTSL 5 BASIC10.16□□□□□ -0.78
CHGAP10645 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC10.16□□□□□ -0.78
CHGAP10645 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
CHGAP10645 Y_RNA.160-201ENST00000363677 92 ntBASIC10.16□□□□□ -0.78
CHGAP10645 MIR16-1-201ENST00000385271 89 ntBASIC10.16□□□□□ -0.78
CHGAP10645 CNN3P1-201ENST00000401596 935 ntBASIC10.16□□□□□ -0.78
CHGAP10645 AL133260.1-201ENST00000405720 405 ntBASIC10.16□□□□□ -0.78
CHGAP10645 AL022100.1-202ENST00000421214 548 ntBASIC10.16□□□□□ -0.78
CHGAP10645 AC093084.1-201ENST00000424233 687 ntBASIC10.16□□□□□ -0.78
CHGAP10645 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC10.16□□□□□ -0.78
CHGAP10645 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC10.16□□□□□ -0.78
CHGAP10645 CLUHP1-201ENST00000435012 1190 ntBASIC10.16□□□□□ -0.78
CHGAP10645 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
CHGAP10645 MYL6P3-201ENST00000436904 432 ntBASIC10.16□□□□□ -0.78
CHGAP10645 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC10.16□□□□□ -0.78
CHGAP10645 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC10.16□□□□□ -0.78
CHGAP10645 VDAC2P4-201ENST00000452925 711 ntBASIC10.16□□□□□ -0.78
CHGAP10645 RPS26P11-201ENST00000463445 348 ntBASIC10.16□□□□□ -0.78
CHGAP10645 AC026336.1-201ENST00000466577 351 ntBASIC10.16□□□□□ -0.78
CHGAP10645 RPS26P6-201ENST00000475156 348 ntBASIC10.16□□□□□ -0.78
CHGAP10645 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC10.16□□□□□ -0.78
CHGAP10645 LRRC34P2-201ENST00000514850 553 ntBASIC10.16□□□□□ -0.78
CHGAP10645 MTCO2P4-201ENST00000517968 247 ntBASIC10.16□□□□□ -0.78
CHGAP10645 IGHVII-60-1-201ENST00000519079 256 ntBASIC10.16□□□□□ -0.78
CHGAP10645 AC239860.2-201ENST00000525886 270 ntBASIC10.16□□□□□ -0.78
CHGAP10645 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC10.16□□□□□ -0.78
CHGAP10645 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC10.16□□□□□ -0.78
CHGAP10645 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC10.16□□□□□ -0.78
CHGAP10645 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC10.16□□□□□ -0.78
CHGAP10645 ULK4P2-202ENST00000564187 492 ntBASIC10.16□□□□□ -0.78
CHGAP10645 MIR3913-1-201ENST00000577744 102 ntBASIC10.16□□□□□ -0.78
CHGAP10645 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC10.16□□□□□ -0.78
CHGAP10645 AL161729.4-201ENST00000604650 476 ntBASIC10.16□□□□□ -0.78
CHGAP10645 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC10.16□□□□□ -0.78
CHGAP10645 AL132796.3-201ENST00000624703 900 ntBASIC10.16□□□□□ -0.78
CHGAP10645 AL049541.2-201ENST00000626377 555 ntBASIC10.16□□□□□ -0.78
CHGAP10645 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC10.16□□□□□ -0.78
CHGAP10645 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHGAP10645 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHGAP10645 NCAPH-201ENST00000240423 2763 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHGAP10645 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC10.16□□□□□ -0.78
CHGAP10645 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CHGAP10645 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHGAP10645 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC10.16□□□□□ -0.78
CHGAP10645 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHGAP10645 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC10.16□□□□□ -0.78
CHGAP10645 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
CHGAP10645 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CHGAP10645 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CHGAP10645 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CHGAP10645 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
CHGAP10645 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CHGAP10645 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC10.15□□□□□ -0.78
CHGAP10645 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CHGAP10645 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC10.15□□□□□ -0.78
CHGAP10645 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC10.15□□□□□ -0.78
CHGAP10645 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CHGAP10645 AC117529.2-201ENST00000512159 2068 ntBASIC10.15□□□□□ -0.78
CHGAP10645 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
CHGAP10645 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CHGAP10645 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CHGAP10645 SNORA63-201ENST00000363450 132 ntBASIC10.15□□□□□ -0.78
CHGAP10645 Y_RNA.295-201ENST00000364918 102 ntBASIC10.15□□□□□ -0.78
CHGAP10645 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
CHGAP10645 RNA5SP105-201ENST00000391123 113 ntBASIC10.15□□□□□ -0.78
CHGAP10645 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CHGAP10645 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC10.15□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms