Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TPM1P09493 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.84□□□□□ -1.47
TPM1P09493 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.84□□□□□ -1.47
TPM1P09493 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TPM1P09493 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.84□□□□□ -1.47
TPM1P09493 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
TPM1P09493 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
TPM1P09493 SAMMSON-213ENST00000641336 1521 ntBASIC5.84□□□□□ -1.48
TPM1P09493 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
TPM1P09493 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TPM1P09493 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TPM1P09493 AC083843.3-201ENST00000623679 2186 ntBASIC5.83□□□□□ -1.48
TPM1P09493 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
TPM1P09493 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
TPM1P09493 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.83□□□□□ -1.48
TPM1P09493 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TPM1P09493 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
TPM1P09493 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TPM1P09493 RNU4-2-201ENST00000365668 141 ntBASIC5.83□□□□□ -1.48
TPM1P09493 UBBP2-201ENST00000376781 231 ntBASIC5.83□□□□□ -1.48
TPM1P09493 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.83□□□□□ -1.48
TPM1P09493 NPM1P22-201ENST00000427761 952 ntBASIC5.83□□□□□ -1.48
TPM1P09493 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.83□□□□□ -1.48
TPM1P09493 AC046176.1-201ENST00000435260 1170 ntBASIC5.83□□□□□ -1.48
TPM1P09493 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.83□□□□□ -1.48
TPM1P09493 DNAJB5P1-201ENST00000454004 806 ntBASIC5.83□□□□□ -1.48
TPM1P09493 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.83□□□□□ -1.48
TPM1P09493 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.83□□□□□ -1.48
TPM1P09493 RPL7P41-201ENST00000485823 957 ntBASIC5.83□□□□□ -1.48
TPM1P09493 RPL15P21-201ENST00000495592 567 ntBASIC5.83□□□□□ -1.48
TPM1P09493 AC138938.1-201ENST00000515431 782 ntBASIC5.83□□□□□ -1.48
TPM1P09493 RN7SKP99-201ENST00000517028 307 ntBASIC5.83□□□□□ -1.48
TPM1P09493 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.83□□□□□ -1.48
TPM1P09493 AP000859.1-201ENST00000525536 307 ntBASIC5.83□□□□□ -1.48
TPM1P09493 AC005341.1-201ENST00000571086 708 ntBASIC5.83□□□□□ -1.48
TPM1P09493 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.83□□□□□ -1.48
TPM1P09493 AC012616.1-201ENST00000600294 197 ntBASIC5.83□□□□□ -1.48
TPM1P09493 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.83□□□□□ -1.48
TPM1P09493 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
TPM1P09493 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.83□□□□□ -1.48
TPM1P09493 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
TPM1P09493 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TPM1P09493 TET1P1-201ENST00000426627 2301 ntBASIC5.83□□□□□ -1.48
TPM1P09493 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.83□□□□□ -1.48
TPM1P09493 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
TPM1P09493 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
TPM1P09493 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
TPM1P09493 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TPM1P09493 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
TPM1P09493 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TPM1P09493 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.82□□□□□ -1.48
TPM1P09493 CASC19-255ENST00000641733 1385 ntBASIC5.82□□□□□ -1.48
TPM1P09493 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TPM1P09493 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TPM1P09493 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
TPM1P09493 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TPM1P09493 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
TPM1P09493 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.82□□□□□ -1.48
TPM1P09493 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
TPM1P09493 AC005522.1-201ENST00000395416 346 ntBASIC5.82□□□□□ -1.48
TPM1P09493 HSPA8P15-201ENST00000401676 786 ntBASIC5.82□□□□□ -1.48
TPM1P09493 AC245060.4-201ENST00000413293 1121 ntBASIC5.82□□□□□ -1.48
TPM1P09493 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.82□□□□□ -1.48
TPM1P09493 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.82□□□□□ -1.48
TPM1P09493 AC234781.4-201ENST00000419384 244 ntBASIC5.82□□□□□ -1.48
TPM1P09493 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TPM1P09493 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.82□□□□□ -1.48
TPM1P09493 AL031584.1-201ENST00000447169 754 ntBASIC5.82□□□□□ -1.48
TPM1P09493 CBX1P5-201ENST00000475330 559 ntBASIC5.82□□□□□ -1.48
TPM1P09493 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.82□□□□□ -1.48
TPM1P09493 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.82□□□□□ -1.48
TPM1P09493 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.82□□□□□ -1.48
TPM1P09493 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.82□□□□□ -1.48
TPM1P09493 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.82□□□□□ -1.48
TPM1P09493 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TPM1P09493 BX005214.3-202ENST00000619809 325 ntBASIC5.82□□□□□ -1.48
TPM1P09493 AC022106.2-201ENST00000620114 757 ntBASIC5.82□□□□□ -1.48
TPM1P09493 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.82□□□□□ -1.48
TPM1P09493 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
TPM1P09493 SCARNA15-201ENST00000607520 4325 ntBASIC5.82□□□□□ -1.48
TPM1P09493 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TPM1P09493 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TPM1P09493 AC114786.1-201ENST00000512892 1415 ntBASIC5.82□□□□□ -1.48
TPM1P09493 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
TPM1P09493 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.81□□□□□ -1.48
TPM1P09493 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TPM1P09493 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
TPM1P09493 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.81□□□□□ -1.48
TPM1P09493 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.81□□□□□ -1.48
TPM1P09493 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TPM1P09493 MAPK10-320ENST00000641462 6696 ntBASIC5.81□□□□□ -1.48
TPM1P09493 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.81□□□□□ -1.48
TPM1P09493 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TPM1P09493 AC093909.5-201ENST00000621839 1799 ntBASIC5.81□□□□□ -1.48
TPM1P09493 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
TPM1P09493 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TPM1P09493 HMGB1P20-201ENST00000402555 677 ntBASIC5.81□□□□□ -1.48
TPM1P09493 MIR1275-201ENST00000408770 80 ntBASIC5.81□□□□□ -1.48
TPM1P09493 AL133173.1-201ENST00000423458 397 ntBASIC5.81□□□□□ -1.48
TPM1P09493 AC012519.1-201ENST00000424588 610 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms