Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC38Q502W7 AC111152.1-202ENST00000635848 339 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 AL596275.2-207ENST00000641188 675 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC38Q502W7 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC38Q502W7 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC38Q502W7 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CCDC38Q502W7 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC38Q502W7 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
CCDC38Q502W7 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
CCDC38Q502W7 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC38Q502W7 AC007842.1-201ENST00000597336 2039 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CCDC38Q502W7 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CCDC38Q502W7 RBMY1HP-201ENST00000382759 1389 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC38Q502W7 PSG10P-201ENST00000501199 1500 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 AC007342.5-201ENST00000571340 2142 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC38Q502W7 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC38Q502W7 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.03□□□□□ -1.44
CCDC38Q502W7 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
CCDC38Q502W7 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC38Q502W7 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC38Q502W7 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC38Q502W7 AL137141.1-201ENST00000624622 4836 ntBASIC6.03□□□□□ -1.44
CCDC38Q502W7 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC38Q502W7 RNU6-252P-201ENST00000363232 107 ntBASIC6.03□□□□□ -1.44
CCDC38Q502W7 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CCDC38Q502W7 UQCRFS1P3-201ENST00000407697 385 ntBASIC6.03□□□□□ -1.44
CCDC38Q502W7 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC38Q502W7 NIFKP3-201ENST00000417799 865 ntBASIC6.03□□□□□ -1.44
CCDC38Q502W7 AL606495.1-201ENST00000422100 813 ntBASIC6.03□□□□□ -1.44
CCDC38Q502W7 AC099677.3-201ENST00000427081 395 ntBASIC6.03□□□□□ -1.44
CCDC38Q502W7 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC38Q502W7 AC002069.1-201ENST00000429649 1159 ntBASIC6.03□□□□□ -1.44
CCDC38Q502W7 AL353662.1-201ENST00000439099 327 ntBASIC6.03□□□□□ -1.44
CCDC38Q502W7 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC38Q502W7 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC38Q502W7 CLIC4P1-201ENST00000453177 535 ntBASIC6.03□□□□□ -1.44
CCDC38Q502W7 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC38Q502W7 HSPE1P22-201ENST00000456856 327 ntBASIC6.03□□□□□ -1.44
CCDC38Q502W7 RN7SL254P-201ENST00000460609 284 ntBASIC6.03□□□□□ -1.44
CCDC38Q502W7 RN7SL168P-201ENST00000463821 279 ntBASIC6.03□□□□□ -1.44
CCDC38Q502W7 RPL38P3-201ENST00000484463 213 ntBASIC6.03□□□□□ -1.44
CCDC38Q502W7 AC073610.1-201ENST00000489971 396 ntBASIC6.03□□□□□ -1.44
CCDC38Q502W7 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC38Q502W7 AP003102.1-201ENST00000525638 661 ntBASIC6.03□□□□□ -1.44
CCDC38Q502W7 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CCDC38Q502W7 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC38Q502W7 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC38Q502W7 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC38Q502W7 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.03□□□□□ -1.44
CCDC38Q502W7 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC38Q502W7 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC38Q502W7 AC012557.1-201ENST00000607115 611 ntBASIC6.03□□□□□ -1.44
CCDC38Q502W7 AL133481.2-203ENST00000607558 139 ntBASIC6.03□□□□□ -1.44
CCDC38Q502W7 Z95327.3-201ENST00000610385 572 ntBASIC6.03□□□□□ -1.44
CCDC38Q502W7 AC022400.9-201ENST00000623633 273 ntBASIC6.03□□□□□ -1.44
CCDC38Q502W7 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC38Q502W7 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC38Q502W7 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC38Q502W7 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.03□□□□□ -1.44
CCDC38Q502W7 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC38Q502W7 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CCDC38Q502W7 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC38Q502W7 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CCDC38Q502W7 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC38Q502W7 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC38Q502W7 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CCDC38Q502W7 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
CCDC38Q502W7 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC38Q502W7 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC38Q502W7 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
CCDC38Q502W7 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC38Q502W7 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC38Q502W7 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC38Q502W7 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC38Q502W7 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CCDC38Q502W7 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
CCDC38Q502W7 EI24P3-201ENST00000399046 1062 ntBASIC6.02□□□□□ -1.45
CCDC38Q502W7 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC38Q502W7 RN7SKP86-201ENST00000410454 332 ntBASIC6.02□□□□□ -1.45
CCDC38Q502W7 RNU4-27P-201ENST00000410889 139 ntBASIC6.02□□□□□ -1.45
CCDC38Q502W7 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC38Q502W7 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.02□□□□□ -1.45
CCDC38Q502W7 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC38Q502W7 MTCO2P1-201ENST00000424648 477 ntBASIC6.02□□□□□ -1.45
CCDC38Q502W7 MGAT2P2-201ENST00000427194 797 ntBASIC6.02□□□□□ -1.45
CCDC38Q502W7 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC38Q502W7 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC38Q502W7 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC38Q502W7 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC38Q502W7 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC38Q502W7 HMGB1P7-201ENST00000450921 612 ntBASIC6.02□□□□□ -1.45
CCDC38Q502W7 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.02□□□□□ -1.45
CCDC38Q502W7 AC107398.1-201ENST00000486904 505 ntBASIC6.02□□□□□ -1.45
CCDC38Q502W7 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC38Q502W7 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms