Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AL607023.1-201ENST00000620045 248 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.03□□□□□ -1.28
SOX4Q06945 MIR6806-201ENST00000622141 64 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 AC009120.7-201ENST00000623452 780 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 AL683826.1-201ENST00000624104 627 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.03□□□□□ -1.28
SOX4Q06945 MIR4278-201ENST00000636094 69 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 AL121936.2-201ENST00000641935 662 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.03□□□□□ -1.28
SOX4Q06945 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SOX4Q06945 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.03□□□□□ -1.28
SOX4Q06945 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.03□□□□□ -1.28
SOX4Q06945 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SOX4Q06945 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.03□□□□□ -1.28
SOX4Q06945 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SOX4Q06945 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SOX4Q06945 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SOX4Q06945 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SOX4Q06945 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SOX4Q06945 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.03□□□□□ -1.28
SOX4Q06945 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.03□□□□□ -1.28
SOX4Q06945 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.03□□□□□ -1.28
SOX4Q06945 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
SOX4Q06945 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
SOX4Q06945 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SOX4Q06945 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SOX4Q06945 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SOX4Q06945 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SOX4Q06945 AL359694.2-201ENST00000567753 1615 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SOX4Q06945 AP003175.1-201ENST00000641383 6658 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
SOX4Q06945 RPL11P4-201ENST00000332269 436 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SOX4Q06945 SNORD35A-201ENST00000363389 86 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 RNA5SP279-201ENST00000365513 117 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 SNORA75-201ENST00000384158 137 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 MIR541-201ENST00000401360 84 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 DNAJC19P6-201ENST00000401853 280 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC7.02□□□□□ -1.29
SOX4Q06945 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC7.02□□□□□ -1.29
SOX4Q06945 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC7.02□□□□□ -1.29
SOX4Q06945 AC245052.5-201ENST00000416320 649 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.02□□□□□ -1.29
SOX4Q06945 MTCO3P1-205ENST00000422088 832 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 VN1R20P-201ENST00000425215 966 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC7.02□□□□□ -1.29
SOX4Q06945 KCTD9P1-201ENST00000430462 1167 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 GAPDHP59-201ENST00000435908 267 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 RAB9AP5-201ENST00000437794 597 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.02□□□□□ -1.29
SOX4Q06945 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.02□□□□□ -1.29
SOX4Q06945 MTND1P30-201ENST00000441241 901 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 RAB9AP2-201ENST00000443911 597 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 AL137845.2-201ENST00000444292 988 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 EEF1E1P1-201ENST00000446998 430 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 AC114755.5-201ENST00000447760 831 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 MTCO1P48-201ENST00000448024 1096 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.02□□□□□ -1.29
SOX4Q06945 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.02□□□□□ -1.29
SOX4Q06945 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.02□□□□□ -1.29
SOX4Q06945 AC117394.1-201ENST00000477323 567 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 AC041039.1-201ENST00000485656 536 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 AC104971.1-201ENST00000495117 578 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC7.02□□□□□ -1.29
SOX4Q06945 AC006499.4-201ENST00000510947 694 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 HNRNPKP5-201ENST00000515300 253 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 RNA5SP418-201ENST00000515951 117 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 SNORA74.1-201ENST00000516320 180 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 AC025881.1-201ENST00000518851 512 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.02□□□□□ -1.29
SOX4Q06945 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC7.02□□□□□ -1.29
SOX4Q06945 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC7.02□□□□□ -1.29
SOX4Q06945 AC079171.1-201ENST00000568788 914 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC7.02□□□□□ -1.29
SOX4Q06945 AC026898.1-201ENST00000586404 571 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC7.02□□□□□ -1.29
SOX4Q06945 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC7.02□□□□□ -1.29
SOX4Q06945 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC7.02□□□□□ -1.29
SOX4Q06945 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC7.02□□□□□ -1.29
SOX4Q06945 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC7.02□□□□□ -1.29
SOX4Q06945 AC109454.4-201ENST00000623411 649 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC7.02□□□□□ -1.29
SOX4Q06945 LINC02495-203ENST00000636704 242 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SOX4Q06945 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.02□□□□□ -1.29
SOX4Q06945 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
SOX4Q06945 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.02□□□□□ -1.29
SOX4Q06945 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
SOX4Q06945 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SOX4Q06945 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SOX4Q06945 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SOX4Q06945 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SOX4Q06945 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.02□□□□□ -1.29
SOX4Q06945 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.02□□□□□ -1.29
SOX4Q06945 AL139384.2-201ENST00000613809 3590 ntBASIC7.02□□□□□ -1.29
SOX4Q06945 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SOX4Q06945 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.01□□□□□ -1.29
SOX4Q06945 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms