Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC3.11□□□□□ -1.91
HSPG2P98160 ARF4P1-201ENST00000605447 541 ntBASIC3.11□□□□□ -1.91
HSPG2P98160 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
HSPG2P98160 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
HSPG2P98160 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
HSPG2P98160 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HSPG2P98160 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC3.11□□□□□ -1.91
HSPG2P98160 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC3.11□□□□□ -1.91
HSPG2P98160 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC3.11□□□□□ -1.91
HSPG2P98160 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
HSPG2P98160 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HSPG2P98160 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HSPG2P98160 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HSPG2P98160 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HSPG2P98160 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HSPG2P98160 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HSPG2P98160 FAT4-201ENST00000335110 9669 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HSPG2P98160 AL359955.1-201ENST00000455242 3275 ntBASIC3.11□□□□□ -1.91
HSPG2P98160 AL731566.1-201ENST00000620490 1937 ntBASIC3.11□□□□□ -1.91
HSPG2P98160 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC3.11□□□□□ -1.91
HSPG2P98160 CEACAMP6-201ENST00000452007 574 ntBASIC3.11□□□□□ -1.91
HSPG2P98160 AC018816.2-201ENST00000621460 353 ntBASIC3.11□□□□□ -1.91
HSPG2P98160 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.11□□□□□ -1.91
HSPG2P98160 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC3.11□□□□□ -1.91
HSPG2P98160 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HSPG2P98160 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC3.11□□□□□ -1.91
HSPG2P98160 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HSPG2P98160 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
HSPG2P98160 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HSPG2P98160 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
HSPG2P98160 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HSPG2P98160 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
HSPG2P98160 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HSPG2P98160 SNORA63.1-201ENST00000362493 131 ntBASIC3.11□□□□□ -1.91
HSPG2P98160 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HSPG2P98160 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HSPG2P98160 RPL23AP24-201ENST00000458203 385 ntBASIC3.11□□□□□ -1.91
HSPG2P98160 AC093827.1-201ENST00000480094 861 ntBASIC3.11□□□□□ -1.91
HSPG2P98160 AL133372.1-201ENST00000493565 745 ntBASIC3.11□□□□□ -1.91
HSPG2P98160 AC073073.1-201ENST00000493920 463 ntBASIC3.11□□□□□ -1.91
HSPG2P98160 OR4A43P-201ENST00000532938 908 ntBASIC3.11□□□□□ -1.91
HSPG2P98160 AC100847.1-201ENST00000611316 481 ntBASIC3.11□□□□□ -1.91
HSPG2P98160 AC243756.2-201ENST00000618406 463 ntBASIC3.11□□□□□ -1.91
HSPG2P98160 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HSPG2P98160 FRMPD4-202ENST00000616992 7916 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
HSPG2P98160 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HSPG2P98160 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
HSPG2P98160 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HSPG2P98160 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HSPG2P98160 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HSPG2P98160 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HSPG2P98160 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC3.1□□□□□ -1.91
HSPG2P98160 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
HSPG2P98160 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HSPG2P98160 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HSPG2P98160 MIR372-201ENST00000362225 67 ntBASIC3.1□□□□□ -1.91
HSPG2P98160 OR1L6-202ENST00000373684 1044 ntBASIC3.1□□□□□ -1.91
HSPG2P98160 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HSPG2P98160 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.1□□□□□ -1.91
HSPG2P98160 AC016027.5-201ENST00000427227 210 ntBASIC3.1□□□□□ -1.91
HSPG2P98160 AL117339.2-201ENST00000430475 180 ntBASIC3.1□□□□□ -1.91
HSPG2P98160 AC016831.4-201ENST00000438302 307 ntBASIC3.1□□□□□ -1.91
HSPG2P98160 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
HSPG2P98160 RPL7P40-201ENST00000481703 745 ntBASIC3.1□□□□□ -1.91
HSPG2P98160 RN7SKP260-201ENST00000516907 149 ntBASIC3.1□□□□□ -1.91
HSPG2P98160 AC122688.1-201ENST00000541494 223 ntBASIC3.1□□□□□ -1.91
HSPG2P98160 MIR3124-201ENST00000582636 67 ntBASIC3.1□□□□□ -1.91
HSPG2P98160 AC114781.5-201ENST00000615297 108 ntBASIC3.1□□□□□ -1.91
HSPG2P98160 AL035461.2-201ENST00000619201 524 ntBASIC3.1□□□□□ -1.91
HSPG2P98160 AP000843.1-201ENST00000624880 701 ntBASIC3.1□□□□□ -1.91
HSPG2P98160 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.1□□□□□ -1.91
HSPG2P98160 AC034229.2-201ENST00000566945 2508 ntBASIC3.1□□□□□ -1.91
HSPG2P98160 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HSPG2P98160 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
HSPG2P98160 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HSPG2P98160 OPHN1-201ENST00000355520 7879 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HSPG2P98160 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HSPG2P98160 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
HSPG2P98160 RNA5SP509-201ENST00000364577 119 ntBASIC3.1□□□□□ -1.91
HSPG2P98160 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.1□□□□□ -1.91
HSPG2P98160 RPS12P10-201ENST00000427031 377 ntBASIC3.1□□□□□ -1.91
HSPG2P98160 AC108751.3-201ENST00000461814 1020 ntBASIC3.1□□□□□ -1.91
HSPG2P98160 MAL2-201ENST00000522112 573 ntTSL 4 BASIC3.1□□□□□ -1.91
HSPG2P98160 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HSPG2P98160 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.1□□□□□ -1.91
HSPG2P98160 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HSPG2P98160 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HSPG2P98160 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HSPG2P98160 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC3.1□□□□□ -1.91
HSPG2P98160 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HSPG2P98160 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HSPG2P98160 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HSPG2P98160 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HSPG2P98160 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC3.1□□□□□ -1.91
HSPG2P98160 OR8V1P-201ENST00000395193 873 ntBASIC3.1□□□□□ -1.91
HSPG2P98160 AL021331.1-201ENST00000402817 582 ntBASIC3.1□□□□□ -1.91
HSPG2P98160 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.1□□□□□ -1.91
HSPG2P98160 OR1H1P-201ENST00000448731 937 ntBASIC3.1□□□□□ -1.91
HSPG2P98160 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.1□□□□□ -1.91
HSPG2P98160 AC245028.2-201ENST00000458673 253 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms