Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.89□□□□□ -1.47
TPM4P67936 LRRC37A14P-201ENST00000452297 462 ntBASIC5.89□□□□□ -1.47
TPM4P67936 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.89□□□□□ -1.47
TPM4P67936 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TPM4P67936 RN7SL591P-201ENST00000496150 292 ntBASIC5.89□□□□□ -1.47
TPM4P67936 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
TPM4P67936 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.89□□□□□ -1.47
TPM4P67936 RN7SL708P-201ENST00000580952 299 ntBASIC5.89□□□□□ -1.47
TPM4P67936 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.89□□□□□ -1.47
TPM4P67936 AL139407.1-201ENST00000613826 1175 ntBASIC5.89□□□□□ -1.47
TPM4P67936 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.89□□□□□ -1.47
TPM4P67936 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.89□□□□□ -1.47
TPM4P67936 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
TPM4P67936 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.89□□□□□ -1.47
TPM4P67936 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TPM4P67936 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.89□□□□□ -1.47
TPM4P67936 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.89□□□□□ -1.47
TPM4P67936 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.89□□□□□ -1.47
TPM4P67936 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
TPM4P67936 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
TPM4P67936 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
TPM4P67936 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.88□□□□□ -1.47
TPM4P67936 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
TPM4P67936 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
TPM4P67936 AL353796.1-201ENST00000561542 3241 ntBASIC5.88□□□□□ -1.47
TPM4P67936 STX3-208ENST00000641815 3236 ntBASIC5.88□□□□□ -1.47
TPM4P67936 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
TPM4P67936 AC063976.2-201ENST00000425667 3556 ntBASIC5.88□□□□□ -1.47
TPM4P67936 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TPM4P67936 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.88□□□□□ -1.47
TPM4P67936 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
TPM4P67936 UBBP2-201ENST00000376781 231 ntBASIC5.88□□□□□ -1.47
TPM4P67936 AL078599.1-201ENST00000402075 293 ntBASIC5.88□□□□□ -1.47
TPM4P67936 MIR1271-201ENST00000408537 86 ntBASIC5.88□□□□□ -1.47
TPM4P67936 MARK2P12-201ENST00000420129 585 ntBASIC5.88□□□□□ -1.47
TPM4P67936 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.88□□□□□ -1.47
TPM4P67936 AL354893.1-201ENST00000433735 348 ntBASIC5.88□□□□□ -1.47
TPM4P67936 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.88□□□□□ -1.47
TPM4P67936 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.88□□□□□ -1.47
TPM4P67936 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
TPM4P67936 EEF1B2P3-201ENST00000447718 678 ntBASIC5.88□□□□□ -1.47
TPM4P67936 LDHBP2-201ENST00000456969 1005 ntBASIC5.88□□□□□ -1.47
TPM4P67936 NPM1P29-201ENST00000483112 803 ntBASIC5.88□□□□□ -1.47
TPM4P67936 RN7SL423P-201ENST00000486202 304 ntBASIC5.88□□□□□ -1.47
TPM4P67936 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.88□□□□□ -1.47
TPM4P67936 AC105031.1-201ENST00000518550 476 ntBASIC5.88□□□□□ -1.47
TPM4P67936 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.88□□□□□ -1.47
TPM4P67936 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.88□□□□□ -1.47
TPM4P67936 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.88□□□□□ -1.47
TPM4P67936 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.88□□□□□ -1.47
TPM4P67936 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.88□□□□□ -1.47
TPM4P67936 RN7SL435P-201ENST00000584418 282 ntBASIC5.88□□□□□ -1.47
TPM4P67936 AC018695.5-201ENST00000605872 315 ntBASIC5.88□□□□□ -1.47
TPM4P67936 AC037198.3-201ENST00000616754 526 ntBASIC5.88□□□□□ -1.47
TPM4P67936 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
TPM4P67936 NEAT1-202ENST00000501122 22743 ntBASIC5.88□□□□□ -1.47
TPM4P67936 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TPM4P67936 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
TPM4P67936 AC006210.2-201ENST00000367074 1545 ntBASIC5.88□□□□□ -1.47
TPM4P67936 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TPM4P67936 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TPM4P67936 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
TPM4P67936 AC007996.1-201ENST00000620414 2821 ntBASIC5.88□□□□□ -1.47
TPM4P67936 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
TPM4P67936 OR7E25P-201ENST00000344844 931 ntBASIC5.87□□□□□ -1.47
TPM4P67936 RNA5SP394-201ENST00000364216 119 ntBASIC5.87□□□□□ -1.47
TPM4P67936 RN7SKP28-201ENST00000364770 305 ntBASIC5.87□□□□□ -1.47
TPM4P67936 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TPM4P67936 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.87□□□□□ -1.47
TPM4P67936 RPL10P10-201ENST00000403509 664 ntBASIC5.87□□□□□ -1.47
TPM4P67936 AL445213.1-201ENST00000412589 747 ntBASIC5.87□□□□□ -1.47
TPM4P67936 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.87□□□□□ -1.47
TPM4P67936 NPM1P33-201ENST00000438918 872 ntBASIC5.87□□□□□ -1.47
TPM4P67936 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.87□□□□□ -1.47
TPM4P67936 MRPL35P2-201ENST00000448009 511 ntBASIC5.87□□□□□ -1.47
TPM4P67936 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.87□□□□□ -1.47
TPM4P67936 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.87□□□□□ -1.47
TPM4P67936 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.87□□□□□ -1.47
TPM4P67936 AC122718.2-201ENST00000505325 591 ntBASIC5.87□□□□□ -1.47
TPM4P67936 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.87□□□□□ -1.47
TPM4P67936 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.87□□□□□ -1.47
TPM4P67936 AP004607.2-201ENST00000533949 322 ntBASIC5.87□□□□□ -1.47
TPM4P67936 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.87□□□□□ -1.47
TPM4P67936 AC060766.1-201ENST00000590824 627 ntBASIC5.87□□□□□ -1.47
TPM4P67936 AL118522.2-201ENST00000616045 615 ntBASIC5.87□□□□□ -1.47
TPM4P67936 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.87□□□□□ -1.47
TPM4P67936 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TPM4P67936 YES1P1-201ENST00000418510 1628 ntBASIC5.87□□□□□ -1.47
TPM4P67936 CDY11P-201ENST00000447168 1651 ntBASIC5.87□□□□□ -1.47
TPM4P67936 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TPM4P67936 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
TPM4P67936 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
TPM4P67936 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.87□□□□□ -1.47
TPM4P67936 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TPM4P67936 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TPM4P67936 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TPM4P67936 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
TPM4P67936 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
TPM4P67936 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
TPM4P67936 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms