Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.75□□□□□ -1.33
RHBDL3P58872 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RHBDL3P58872 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
RHBDL3P58872 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.75□□□□□ -1.33
RHBDL3P58872 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
RHBDL3P58872 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RHBDL3P58872 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RHBDL3P58872 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RHBDL3P58872 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RHBDL3P58872 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
RHBDL3P58872 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
RHBDL3P58872 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
RHBDL3P58872 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
RHBDL3P58872 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.74□□□□□ -1.33
RHBDL3P58872 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.74□□□□□ -1.33
RHBDL3P58872 RN7SKP28-201ENST00000364770 305 ntBASIC6.74□□□□□ -1.33
RHBDL3P58872 CHMP1B2P-201ENST00000399581 597 ntBASIC6.74□□□□□ -1.33
RHBDL3P58872 AC009804.1-201ENST00000400949 179 ntBASIC6.74□□□□□ -1.33
RHBDL3P58872 MIR1286-201ENST00000408112 78 ntBASIC6.74□□□□□ -1.33
RHBDL3P58872 RNA5SP251-201ENST00000410614 137 ntBASIC6.74□□□□□ -1.33
RHBDL3P58872 RPL35AP24-201ENST00000413846 330 ntBASIC6.74□□□□□ -1.33
RHBDL3P58872 OR51A6P-201ENST00000418680 1004 ntBASIC6.74□□□□□ -1.33
RHBDL3P58872 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.74□□□□□ -1.33
RHBDL3P58872 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.74□□□□□ -1.33
RHBDL3P58872 HSPE1P16-201ENST00000426640 348 ntBASIC6.74□□□□□ -1.33
RHBDL3P58872 RPS3AP38-201ENST00000435889 763 ntBASIC6.74□□□□□ -1.33
RHBDL3P58872 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.74□□□□□ -1.33
RHBDL3P58872 SCAND3P1-201ENST00000439854 1060 ntBASIC6.74□□□□□ -1.33
RHBDL3P58872 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.74□□□□□ -1.33
RHBDL3P58872 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.74□□□□□ -1.33
RHBDL3P58872 AC037198.2-201ENST00000478845 733 ntBASIC6.74□□□□□ -1.33
RHBDL3P58872 AC116562.1-201ENST00000485355 781 ntBASIC6.74□□□□□ -1.33
RHBDL3P58872 AC008628.1-201ENST00000508663 265 ntBASIC6.74□□□□□ -1.33
RHBDL3P58872 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.74□□□□□ -1.33
RHBDL3P58872 AC103833.1-201ENST00000517442 172 ntBASIC6.74□□□□□ -1.33
RHBDL3P58872 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.74□□□□□ -1.33
RHBDL3P58872 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
RHBDL3P58872 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.74□□□□□ -1.33
RHBDL3P58872 AP002373.2-201ENST00000541631 1060 ntBASIC6.74□□□□□ -1.33
RHBDL3P58872 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.74□□□□□ -1.33
RHBDL3P58872 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.74□□□□□ -1.33
RHBDL3P58872 AC016769.4-201ENST00000616893 535 ntBASIC6.74□□□□□ -1.33
RHBDL3P58872 AL645927.2-201ENST00000618350 349 ntBASIC6.74□□□□□ -1.33
RHBDL3P58872 AC069234.4-201ENST00000621276 412 ntBASIC6.74□□□□□ -1.33
RHBDL3P58872 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.74□□□□□ -1.33
RHBDL3P58872 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.74□□□□□ -1.33
RHBDL3P58872 CASC19-264ENST00000641912 1184 ntBASIC6.74□□□□□ -1.33
RHBDL3P58872 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RHBDL3P58872 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RHBDL3P58872 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RHBDL3P58872 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.74□□□□□ -1.33
RHBDL3P58872 AL359715.3-201ENST00000569267 2123 ntBASIC6.74□□□□□ -1.33
RHBDL3P58872 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RHBDL3P58872 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RHBDL3P58872 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RHBDL3P58872 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RHBDL3P58872 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RHBDL3P58872 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RHBDL3P58872 AC007159.1-201ENST00000566529 4706 ntBASIC6.74□□□□□ -1.33
RHBDL3P58872 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RHBDL3P58872 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RHBDL3P58872 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.73□□□□□ -1.33
RHBDL3P58872 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
RHBDL3P58872 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.73□□□□□ -1.33
RHBDL3P58872 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RHBDL3P58872 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RHBDL3P58872 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RHBDL3P58872 AC079298.1-201ENST00000625026 1619 ntBASIC6.73□□□□□ -1.33
RHBDL3P58872 CASC19-284ENST00000642142 1868 ntBASIC6.73□□□□□ -1.33
RHBDL3P58872 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RHBDL3P58872 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RHBDL3P58872 AL021877.2-201ENST00000624442 10684 ntBASIC6.73□□□□□ -1.33
RHBDL3P58872 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.73□□□□□ -1.33
RHBDL3P58872 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
RHBDL3P58872 RNA5SP91-201ENST00000390902 119 ntBASIC6.73□□□□□ -1.33
RHBDL3P58872 AC016769.2-201ENST00000414815 475 ntBASIC6.73□□□□□ -1.33
RHBDL3P58872 AC019070.1-201ENST00000415008 1024 ntBASIC6.73□□□□□ -1.33
RHBDL3P58872 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.73□□□□□ -1.33
RHBDL3P58872 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.73□□□□□ -1.33
RHBDL3P58872 AC022022.1-201ENST00000430304 178 ntBASIC6.73□□□□□ -1.33
RHBDL3P58872 RPL17P35-201ENST00000432217 549 ntBASIC6.73□□□□□ -1.33
RHBDL3P58872 OR6D1P-201ENST00000436165 939 ntBASIC6.73□□□□□ -1.33
RHBDL3P58872 CYCSP12-201ENST00000437729 300 ntBASIC6.73□□□□□ -1.33
RHBDL3P58872 CACYBPP1-201ENST00000438592 684 ntBASIC6.73□□□□□ -1.33
RHBDL3P58872 AC074367.1-201ENST00000438685 1125 ntBASIC6.73□□□□□ -1.33
RHBDL3P58872 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.73□□□□□ -1.33
RHBDL3P58872 AC024558.1-201ENST00000505008 528 ntBASIC6.73□□□□□ -1.33
RHBDL3P58872 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.73□□□□□ -1.33
RHBDL3P58872 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.73□□□□□ -1.33
RHBDL3P58872 RNU6-467P-201ENST00000517027 110 ntBASIC6.73□□□□□ -1.33
RHBDL3P58872 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.73□□□□□ -1.33
RHBDL3P58872 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.73□□□□□ -1.33
RHBDL3P58872 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
RHBDL3P58872 AL049870.4-201ENST00000555741 486 ntBASIC6.73□□□□□ -1.33
RHBDL3P58872 AC023158.1-201ENST00000561632 1025 ntBASIC6.73□□□□□ -1.33
RHBDL3P58872 AC119501.1-201ENST00000603646 475 ntBASIC6.73□□□□□ -1.33
RHBDL3P58872 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC6.73□□□□□ -1.33
RHBDL3P58872 AC025574.2-201ENST00000615621 514 ntBASIC6.73□□□□□ -1.33
RHBDL3P58872 AL118522.2-201ENST00000616045 615 ntBASIC6.73□□□□□ -1.33
RHBDL3P58872 AC018445.2-201ENST00000622987 260 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms