Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 HIGD1AP14-201ENST00000507617 282 ntBASIC5.24□□□□□ -1.57
LRRTM2O43300 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.24□□□□□ -1.57
LRRTM2O43300 IGLV3-30-201ENST00000524362 298 ntBASIC5.24□□□□□ -1.57
LRRTM2O43300 AC025423.2-201ENST00000537570 439 ntBASIC5.24□□□□□ -1.57
LRRTM2O43300 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.24□□□□□ -1.57
LRRTM2O43300 AC084033.1-201ENST00000550830 633 ntBASIC5.24□□□□□ -1.57
LRRTM2O43300 AL121839.1-201ENST00000556233 1185 ntBASIC5.24□□□□□ -1.57
LRRTM2O43300 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.24□□□□□ -1.57
LRRTM2O43300 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.24□□□□□ -1.57
LRRTM2O43300 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.24□□□□□ -1.57
LRRTM2O43300 AC024940.4-201ENST00000605507 246 ntBASIC5.24□□□□□ -1.57
LRRTM2O43300 AL359513.1-201ENST00000614364 557 ntBASIC5.24□□□□□ -1.57
LRRTM2O43300 AL139099.4-201ENST00000614802 114 ntBASIC5.24□□□□□ -1.57
LRRTM2O43300 AC022960.2-201ENST00000616300 666 ntBASIC5.24□□□□□ -1.57
LRRTM2O43300 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.24□□□□□ -1.57
LRRTM2O43300 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.24□□□□□ -1.57
LRRTM2O43300 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.24□□□□□ -1.57
LRRTM2O43300 CASC19-264ENST00000641912 1184 ntBASIC5.24□□□□□ -1.57
LRRTM2O43300 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRRTM2O43300 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LRRTM2O43300 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
LRRTM2O43300 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRRTM2O43300 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRRTM2O43300 AC004158.1-201ENST00000564508 4319 ntBASIC5.24□□□□□ -1.57
LRRTM2O43300 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.24□□□□□ -1.57
LRRTM2O43300 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRRTM2O43300 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRRTM2O43300 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRRTM2O43300 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LRRTM2O43300 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LRRTM2O43300 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.23□□□□□ -1.57
LRRTM2O43300 MFSD8-239ENST00000641590 2479 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LRRTM2O43300 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.23□□□□□ -1.57
LRRTM2O43300 YES1P1-201ENST00000418510 1628 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.23□□□□□ -1.57
LRRTM2O43300 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
LRRTM2O43300 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LRRTM2O43300 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
LRRTM2O43300 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
LRRTM2O43300 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.23□□□□□ -1.57
LRRTM2O43300 MIR223-201ENST00000385204 110 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
LRRTM2O43300 RMRPP5-201ENST00000411156 267 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 RN7SKP279-201ENST00000411383 298 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 SEPT7P8-201ENST00000413308 775 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LRRTM2O43300 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.23□□□□□ -1.57
LRRTM2O43300 NFYAP1-201ENST00000431953 972 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.23□□□□□ -1.57
LRRTM2O43300 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.23□□□□□ -1.57
LRRTM2O43300 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.23□□□□□ -1.57
LRRTM2O43300 OTX2P1-201ENST00000450956 354 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 AC004129.2-201ENST00000457229 287 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.23□□□□□ -1.57
LRRTM2O43300 AC104164.1-201ENST00000460282 590 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 AC107015.1-201ENST00000466902 747 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 RN7SL329P-201ENST00000467740 299 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 RPL35AP19-201ENST00000469425 329 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LRRTM2O43300 RPL7P39-201ENST00000481157 744 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 DEFB109A-201ENST00000482450 265 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 AC008953.1-201ENST00000497334 318 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.23□□□□□ -1.57
LRRTM2O43300 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.23□□□□□ -1.57
LRRTM2O43300 AC092593.2-201ENST00000513866 913 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 CDC42P3-201ENST00000518493 633 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.23□□□□□ -1.57
LRRTM2O43300 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.23□□□□□ -1.57
LRRTM2O43300 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 AL121594.2-201ENST00000541658 472 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.23□□□□□ -1.57
LRRTM2O43300 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.23□□□□□ -1.57
LRRTM2O43300 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.23□□□□□ -1.57
LRRTM2O43300 MIR4260-201ENST00000583107 67 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.23□□□□□ -1.57
LRRTM2O43300 RPSAP73-201ENST00000614820 330 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.23□□□□□ -1.57
LRRTM2O43300 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LRRTM2O43300 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
LRRTM2O43300 MAPK10-338ENST00000641647 3362 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
LRRTM2O43300 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LRRTM2O43300 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LRRTM2O43300 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LRRTM2O43300 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.23□□□□□ -1.57
LRRTM2O43300 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.23□□□□□ -1.57
LRRTM2O43300 SAMMSON-213ENST00000641336 1521 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 AC114786.1-201ENST00000512892 1415 ntBASIC5.23□□□□□ -1.57
LRRTM2O43300 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LRRTM2O43300 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.22□□□□□ -1.57
LRRTM2O43300 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LRRTM2O43300 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRRTM2O43300 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LRRTM2O43300 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
LRRTM2O43300 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LRRTM2O43300 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LRRTM2O43300 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
LRRTM2O43300 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms