Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AP005202.1-201ENST00000489915 867 ntBASIC7.13□□□□□ -1.27
SOX1O00570 WBP1LP4-201ENST00000505043 344 ntBASIC7.13□□□□□ -1.27
SOX1O00570 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC7.13□□□□□ -1.27
SOX1O00570 KRT19P6-201ENST00000510983 209 ntBASIC7.13□□□□□ -1.27
SOX1O00570 AC013701.1-201ENST00000522657 465 ntBASIC7.13□□□□□ -1.27
SOX1O00570 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC7.13□□□□□ -1.27
SOX1O00570 AC027026.1-201ENST00000532323 742 ntBASIC7.13□□□□□ -1.27
SOX1O00570 OR4A21P-201ENST00000532759 944 ntBASIC7.13□□□□□ -1.27
SOX1O00570 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC7.13□□□□□ -1.27
SOX1O00570 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.13□□□□□ -1.27
SOX1O00570 ZNF519P2-201ENST00000557032 169 ntBASIC7.13□□□□□ -1.27
SOX1O00570 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.13□□□□□ -1.27
SOX1O00570 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC7.13□□□□□ -1.27
SOX1O00570 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.13□□□□□ -1.27
SOX1O00570 AC008507.1-201ENST00000587506 734 ntBASIC7.13□□□□□ -1.27
SOX1O00570 AC068790.7-201ENST00000602347 528 ntBASIC7.13□□□□□ -1.27
SOX1O00570 AC092354.1-201ENST00000606057 376 ntBASIC7.13□□□□□ -1.27
SOX1O00570 RNU4-89P-201ENST00000607443 133 ntBASIC7.13□□□□□ -1.27
SOX1O00570 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.13□□□□□ -1.27
SOX1O00570 MIR6810-201ENST00000622701 70 ntBASIC7.13□□□□□ -1.27
SOX1O00570 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.13□□□□□ -1.27
SOX1O00570 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC7.13□□□□□ -1.27
SOX1O00570 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
SOX1O00570 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.13□□□□□ -1.27
SOX1O00570 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SOX1O00570 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
SOX1O00570 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SOX1O00570 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
SOX1O00570 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
SOX1O00570 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.13□□□□□ -1.27
SOX1O00570 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
SOX1O00570 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC7.12□□□□□ -1.27
SOX1O00570 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SOX1O00570 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
SOX1O00570 AC073055.1-201ENST00000456901 1621 ntBASIC7.12□□□□□ -1.27
SOX1O00570 IL24-207ENST00000611909 1621 ntTSL 3 BASIC7.12□□□□□ -1.27
SOX1O00570 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC7.12□□□□□ -1.27
SOX1O00570 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC7.12□□□□□ -1.27
SOX1O00570 AL162171.3-201ENST00000617439 3178 ntBASIC7.12□□□□□ -1.27
SOX1O00570 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SOX1O00570 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SOX1O00570 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.12□□□□□ -1.27
SOX1O00570 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SOX1O00570 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC7.12□□□□□ -1.27
SOX1O00570 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SOX1O00570 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SOX1O00570 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC7.12□□□□□ -1.27
SOX1O00570 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SOX1O00570 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.12□□□□□ -1.27
SOX1O00570 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
SOX1O00570 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SOX1O00570 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
SOX1O00570 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SOX1O00570 RN7SKP160-201ENST00000363804 340 ntBASIC7.12□□□□□ -1.27
SOX1O00570 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
SOX1O00570 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
SOX1O00570 OR3A2-201ENST00000408891 1076 ntBASIC7.12□□□□□ -1.27
SOX1O00570 HMGB3P31-201ENST00000413333 595 ntBASIC7.12□□□□□ -1.27
SOX1O00570 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC7.12□□□□□ -1.27
SOX1O00570 AC027644.1-201ENST00000419595 298 ntBASIC7.12□□□□□ -1.27
SOX1O00570 FTH1P5-201ENST00000425761 545 ntBASIC7.12□□□□□ -1.27
SOX1O00570 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC7.12□□□□□ -1.27
SOX1O00570 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC7.12□□□□□ -1.27
SOX1O00570 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC7.12□□□□□ -1.27
SOX1O00570 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC7.12□□□□□ -1.27
SOX1O00570 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC7.12□□□□□ -1.27
SOX1O00570 AC002486.2-201ENST00000447806 590 ntBASIC7.12□□□□□ -1.27
SOX1O00570 PPIAP7-201ENST00000454070 489 ntBASIC7.12□□□□□ -1.27
SOX1O00570 SNRPGP9-201ENST00000456025 225 ntBASIC7.12□□□□□ -1.27
SOX1O00570 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC7.12□□□□□ -1.27
SOX1O00570 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC7.12□□□□□ -1.27
SOX1O00570 DAP3-209ENST00000465375 729 ntTSL 2 BASIC7.12□□□□□ -1.27
SOX1O00570 PFN1P6-201ENST00000476786 399 ntBASIC7.12□□□□□ -1.27
SOX1O00570 HMGB1P36-201ENST00000487709 576 ntBASIC7.12□□□□□ -1.27
SOX1O00570 AC063943.2-201ENST00000495697 534 ntBASIC7.12□□□□□ -1.27
SOX1O00570 AC147055.4-201ENST00000504399 745 ntBASIC7.12□□□□□ -1.27
SOX1O00570 AC139272.1-201ENST00000505516 640 ntBASIC7.12□□□□□ -1.27
SOX1O00570 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC7.12□□□□□ -1.27
SOX1O00570 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC7.12□□□□□ -1.27
SOX1O00570 AC008837.2-201ENST00000513076 418 ntBASIC7.12□□□□□ -1.27
SOX1O00570 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7.12□□□□□ -1.27
SOX1O00570 RNA5SP438-201ENST00000516561 112 ntBASIC7.12□□□□□ -1.27
SOX1O00570 AC025881.1-201ENST00000518851 512 ntBASIC7.12□□□□□ -1.27
SOX1O00570 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC7.12□□□□□ -1.27
SOX1O00570 AP000620.1-201ENST00000527147 504 ntBASIC7.12□□□□□ -1.27
SOX1O00570 MED28P5-201ENST00000528254 438 ntBASIC7.12□□□□□ -1.27
SOX1O00570 OR4A43P-201ENST00000532938 908 ntBASIC7.12□□□□□ -1.27
SOX1O00570 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC7.12□□□□□ -1.27
SOX1O00570 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SOX1O00570 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC7.12□□□□□ -1.27
SOX1O00570 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SOX1O00570 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.12□□□□□ -1.27
SOX1O00570 AC092121.1-201ENST00000569452 202 ntBASIC7.12□□□□□ -1.27
SOX1O00570 MIR3691-201ENST00000578066 90 ntBASIC7.12□□□□□ -1.27
SOX1O00570 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC7.12□□□□□ -1.27
SOX1O00570 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.12□□□□□ -1.27
SOX1O00570 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC7.12□□□□□ -1.27
SOX1O00570 AC009120.7-201ENST00000623452 780 ntBASIC7.12□□□□□ -1.27
SOX1O00570 AC135068.5-201ENST00000624197 983 ntBASIC7.12□□□□□ -1.27
SOX1O00570 AC015726.3-201ENST00000624501 418 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms