Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC020978.7-201ENST00000575953 1187 ntBASIC5.11□□□□□ -1.59
COL21A1Q96P44 AC127024.5-201ENST00000580085 462 ntBASIC5.11□□□□□ -1.59
COL21A1Q96P44 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 AC012616.1-201ENST00000600294 197 ntBASIC5.11□□□□□ -1.59
COL21A1Q96P44 AC104695.2-201ENST00000605056 775 ntBASIC5.11□□□□□ -1.59
COL21A1Q96P44 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 AC132825.8-201ENST00000640783 297 ntBASIC5.11□□□□□ -1.59
COL21A1Q96P44 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 AC073136.1-201ENST00000449426 2884 ntBASIC5.11□□□□□ -1.59
COL21A1Q96P44 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL21A1Q96P44 AC100757.1-201ENST00000616872 1835 ntBASIC5.11□□□□□ -1.59
COL21A1Q96P44 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL21A1Q96P44 AC003973.3-201ENST00000624863 2822 ntBASIC5.1□□□□□ -1.59
COL21A1Q96P44 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
COL21A1Q96P44 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
COL21A1Q96P44 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
COL21A1Q96P44 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.1□□□□□ -1.59
COL21A1Q96P44 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL21A1Q96P44 AC026523.2-201ENST00000625039 7739 ntBASIC5.1□□□□□ -1.59
COL21A1Q96P44 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL21A1Q96P44 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
COL21A1Q96P44 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.1□□□□□ -1.59
COL21A1Q96P44 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.1□□□□□ -1.59
COL21A1Q96P44 ADAM5-202ENST00000399789 1942 ntBASIC5.1□□□□□ -1.59
COL21A1Q96P44 Z93019.1-201ENST00000416450 973 ntBASIC5.1□□□□□ -1.59
COL21A1Q96P44 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.1□□□□□ -1.59
COL21A1Q96P44 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.1□□□□□ -1.59
COL21A1Q96P44 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.1□□□□□ -1.59
COL21A1Q96P44 AC023141.9-201ENST00000458734 412 ntBASIC5.1□□□□□ -1.59
COL21A1Q96P44 RPSAP39-201ENST00000467439 883 ntBASIC5.1□□□□□ -1.59
COL21A1Q96P44 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL21A1Q96P44 RN7SL466P-201ENST00000497546 295 ntBASIC5.1□□□□□ -1.59
COL21A1Q96P44 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.1□□□□□ -1.59
COL21A1Q96P44 RN7SKP99-201ENST00000517028 307 ntBASIC5.1□□□□□ -1.59
COL21A1Q96P44 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.1□□□□□ -1.59
COL21A1Q96P44 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
COL21A1Q96P44 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.1□□□□□ -1.59
COL21A1Q96P44 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.1□□□□□ -1.59
COL21A1Q96P44 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.1□□□□□ -1.59
COL21A1Q96P44 AC108738.1-201ENST00000603703 237 ntBASIC5.1□□□□□ -1.59
COL21A1Q96P44 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.1□□□□□ -1.59
COL21A1Q96P44 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.1□□□□□ -1.59
COL21A1Q96P44 AC091932.2-201ENST00000623014 291 ntBASIC5.1□□□□□ -1.59
COL21A1Q96P44 AC132068.1-201ENST00000623805 459 ntBASIC5.1□□□□□ -1.59
COL21A1Q96P44 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.1□□□□□ -1.59
COL21A1Q96P44 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
COL21A1Q96P44 AC073869.8-201ENST00000641806 335 ntBASIC5.1□□□□□ -1.59
COL21A1Q96P44 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.1□□□□□ -1.59
COL21A1Q96P44 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.1□□□□□ -1.59
COL21A1Q96P44 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
COL21A1Q96P44 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.09□□□□□ -1.59
COL21A1Q96P44 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.09□□□□□ -1.59
COL21A1Q96P44 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.09□□□□□ -1.59
COL21A1Q96P44 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL21A1Q96P44 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
COL21A1Q96P44 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL21A1Q96P44 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
COL21A1Q96P44 RNA5SP242-201ENST00000364171 118 ntBASIC5.09□□□□□ -1.59
COL21A1Q96P44 RN7SKP124-201ENST00000364730 341 ntBASIC5.09□□□□□ -1.59
COL21A1Q96P44 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.09□□□□□ -1.59
COL21A1Q96P44 AC019185.1-201ENST00000442718 389 ntBASIC5.09□□□□□ -1.59
COL21A1Q96P44 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.09□□□□□ -1.59
COL21A1Q96P44 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.09□□□□□ -1.59
COL21A1Q96P44 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.09□□□□□ -1.59
COL21A1Q96P44 RN7SL174P-201ENST00000475578 289 ntBASIC5.09□□□□□ -1.59
COL21A1Q96P44 AC069304.1-201ENST00000491593 704 ntBASIC5.09□□□□□ -1.59
COL21A1Q96P44 AC016559.2-201ENST00000510759 359 ntBASIC5.09□□□□□ -1.59
COL21A1Q96P44 RNU6-1334P-201ENST00000516032 105 ntBASIC5.09□□□□□ -1.59
COL21A1Q96P44 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.09□□□□□ -1.59
COL21A1Q96P44 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.09□□□□□ -1.59
COL21A1Q96P44 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.09□□□□□ -1.59
COL21A1Q96P44 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.09□□□□□ -1.59
COL21A1Q96P44 AC012146.2-201ENST00000576545 416 ntBASIC5.09□□□□□ -1.59
COL21A1Q96P44 AP005403.1-201ENST00000579720 229 ntBASIC5.09□□□□□ -1.59
COL21A1Q96P44 SNORD95-201ENST00000579879 68 ntBASIC5.09□□□□□ -1.59
COL21A1Q96P44 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.09□□□□□ -1.59
COL21A1Q96P44 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL21A1Q96P44 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.09□□□□□ -1.59
COL21A1Q96P44 Z95327.3-201ENST00000610385 572 ntBASIC5.09□□□□□ -1.59
COL21A1Q96P44 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.09□□□□□ -1.59
COL21A1Q96P44 AC004477.3-201ENST00000614061 590 ntBASIC5.09□□□□□ -1.59
COL21A1Q96P44 AL118522.2-201ENST00000616045 615 ntBASIC5.09□□□□□ -1.59
COL21A1Q96P44 MIR6729-201ENST00000618194 65 ntBASIC5.09□□□□□ -1.59
COL21A1Q96P44 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.09□□□□□ -1.59
COL21A1Q96P44 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.09□□□□□ -1.59
COL21A1Q96P44 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
COL21A1Q96P44 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL21A1Q96P44 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL21A1Q96P44 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL21A1Q96P44 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
COL21A1Q96P44 AL078621.3-201ENST00000623707 2042 ntBASIC5.09□□□□□ -1.6
COL21A1Q96P44 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.09□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms