Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RPL21P108-201ENST00000413857 481 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 LINC00993-201ENST00000420453 540 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 RPS26P4-201ENST00000431743 355 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 OR6R1P-201ENST00000431838 940 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 OR2AF1P-201ENST00000454899 889 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 PMCHL2-203ENST00000457791 237 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 CCDC75P1-201ENST00000469247 791 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 VPS26AP1-201ENST00000483197 979 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 AL358832.1-201ENST00000497800 389 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 PCNAP1-201ENST00000505363 709 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 B3GNTL1P1-201ENST00000509174 289 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 HMGB1P47-201ENST00000511281 589 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 AC022483.1-201ENST00000514020 567 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 RNU6-678P-201ENST00000516832 109 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 AP005902.2-201ENST00000518393 307 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 ACER3-213ENST00000533873 929 ntTSL 2 BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 HIGD1AP17-201ENST00000554576 276 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 HNRNPA1P71-201ENST00000559135 950 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 AL133457.1-201ENST00000564251 987 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 WBP1LP12-201ENST00000604449 331 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 AC097381.3-201ENST00000608962 462 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 RN7SL126P-201ENST00000616400 299 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 OR1S1-201ENST00000624470 978 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 AC092999.1-201ENST00000624004 1924 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 AL133268.1-201ENST00000405676 1401 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 AL356361.1-201ENST00000400943 1459 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 AC125603.4-201ENST00000621942 2699 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 AL031123.3-201ENST00000623345 1837 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 OR56B2P-201ENST00000317102 954 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 ODF3-202ENST00000342593 386 ntTSL 5 BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 SNORD35A-201ENST00000363389 86 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 Y_RNA.138-201ENST00000363462 102 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 FCF1P10-201ENST00000407590 479 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 SNORA11B-201ENST00000408175 129 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 MIR1275-201ENST00000408770 80 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 RANP6-201ENST00000413691 644 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 RPL26P29-201ENST00000415623 438 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 CDC42P6-201ENST00000421246 576 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 AC009784.1-201ENST00000426484 460 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 RPL5P34-201ENST00000426545 891 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 AL512649.1-201ENST00000428997 581 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 ZYG11AP1-201ENST00000430329 837 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 AC242426.1-201ENST00000435270 960 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 HMGB1P48-201ENST00000446155 598 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 RPL23AP23-201ENST00000452590 471 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 MEF2AP1-201ENST00000454867 863 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 RPSAP7-201ENST00000456871 885 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 BX323845.2-201ENST00000458382 234 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 AC130364.2-201ENST00000528639 604 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 AC004923.2-201ENST00000529649 369 ntBASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms