Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LRCH3Q96II8 MAP3K19-205ENST00000392917 1765 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
LRCH3Q96II8 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC8.27□□□□□ -1.08
LRCH3Q96II8 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC8.27□□□□□ -1.08
LRCH3Q96II8 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
LRCH3Q96II8 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.08
LRCH3Q96II8 AL353763.2-201ENST00000623489 1903 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 NMD3P1-201ENST00000439704 1488 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
LRCH3Q96II8 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LRCH3Q96II8 AC015689.2-201ENST00000528172 1738 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 Y_RNA.381-201ENST00000365666 102 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 AL450124.1-201ENST00000376401 353 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 RNU6-308P-201ENST00000390957 107 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 RPL36AP53-201ENST00000432891 316 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 IFNA20P-201ENST00000436840 528 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 PMS2P9-201ENST00000441237 515 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 AL137074.1-201ENST00000442640 465 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 ARL2BPP7-201ENST00000446421 490 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 PMS2P11-201ENST00000451831 574 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 MTND1P12-201ENST00000455231 147 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 HMGN2P26-201ENST00000463169 339 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 TDGF1P6-201ENST00000463873 448 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 MRPS17P3-201ENST00000465453 385 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 MTND4P17-201ENST00000470444 350 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 AC107220.1-201ENST00000514347 1037 ntTSL 3 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 IGHVII-78-1-201ENST00000521105 269 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 OR7E96P-201ENST00000530816 976 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 MIR4742-201ENST00000581069 85 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 AC115286.1-201ENST00000604298 434 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 DISC2.1-201ENST00000612827 205 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 AC234782.5-201ENST00000617723 324 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 AC243830.2-201ENST00000618067 630 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 AL356585.4-201ENST00000623078 1229 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 AC091953.4-201ENST00000625179 341 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 ATG13-201ENST00000359513 4348 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LRCH3Q96II8 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 ADAM2-205ENST00000521880 2125 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LRCH3Q96II8 LINC00294-201ENST00000631190 3306 ntBASIC8.27□□□□□ -1.09
LRCH3Q96II8 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LRCH3Q96II8 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LRCH3Q96II8 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LRCH3Q96II8 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LRCH3Q96II8 HHAT-203ENST00000367010 3626 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LRCH3Q96II8 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LRCH3Q96II8 HCG18-240ENST00000454269 2430 ntTSL 2 BASIC8.27□□□□□ -1.09
LRCH3Q96II8 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LRCH3Q96II8 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LRCH3Q96II8 AL355103.1-201ENST00000557246 2226 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
LRCH3Q96II8 LINC01692-201ENST00000441009 2719 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
LRCH3Q96II8 GNAI1-205ENST00000457358 1633 ntTSL 2 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 TOPORSLP1-201ENST00000467693 2102 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LRCH3Q96II8 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LRCH3Q96II8 MXRA7-207ENST00000592148 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
LRCH3Q96II8 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LRCH3Q96II8 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LRCH3Q96II8 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
LRCH3Q96II8 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LRCH3Q96II8 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LRCH3Q96II8 SNORD35A-201ENST00000363389 86 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 Y_RNA.149-201ENST00000363558 117 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 Y_RNA.159-201ENST00000363674 87 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 RPL7P58-201ENST00000402913 758 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 RN7SKP59-201ENST00000410520 314 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 RNU6-1148P-201ENST00000410992 104 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 AL603650.1-201ENST00000412680 240 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 ELOCP4-201ENST00000420090 333 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms