Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RNF43Q68DV7 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF43Q68DV7 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF43Q68DV7 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF43Q68DV7 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF43Q68DV7 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF43Q68DV7 AC020658.2-201ENST00000559030 4020 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RNF43Q68DV7 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF43Q68DV7 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF43Q68DV7 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
RNF43Q68DV7 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.09□□□□□ -1.27
RNF43Q68DV7 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF43Q68DV7 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
RNF43Q68DV7 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF43Q68DV7 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
RNF43Q68DV7 RN7SKP189-201ENST00000365042 330 ntBASIC7.09□□□□□ -1.27
RNF43Q68DV7 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF43Q68DV7 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RNF43Q68DV7 U6.112-201ENST00000384129 70 ntBASIC7.09□□□□□ -1.27
RNF43Q68DV7 AC005522.1-201ENST00000395416 346 ntBASIC7.09□□□□□ -1.27
RNF43Q68DV7 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF43Q68DV7 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC7.09□□□□□ -1.27
RNF43Q68DV7 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RNF43Q68DV7 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC7.09□□□□□ -1.27
RNF43Q68DV7 MRPS36P1-201ENST00000421291 307 ntBASIC7.09□□□□□ -1.27
RNF43Q68DV7 ARAFP1-201ENST00000422172 605 ntBASIC7.09□□□□□ -1.27
RNF43Q68DV7 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.09□□□□□ -1.27
RNF43Q68DV7 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC7.09□□□□□ -1.27
RNF43Q68DV7 AC013410.1-201ENST00000436223 1232 ntBASIC7.09□□□□□ -1.27
RNF43Q68DV7 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RNF43Q68DV7 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC7.09□□□□□ -1.27
RNF43Q68DV7 AL606662.1-201ENST00000445763 553 ntBASIC7.09□□□□□ -1.27
RNF43Q68DV7 AC023271.1-201ENST00000445936 1090 ntBASIC7.09□□□□□ -1.27
RNF43Q68DV7 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF43Q68DV7 SETP11-201ENST00000473027 690 ntBASIC7.09□□□□□ -1.27
RNF43Q68DV7 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RNF43Q68DV7 MTATP6P22-201ENST00000507369 598 ntBASIC7.09□□□□□ -1.27
RNF43Q68DV7 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF43Q68DV7 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC7.09□□□□□ -1.27
RNF43Q68DV7 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF43Q68DV7 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF43Q68DV7 EEF1B2P2-201ENST00000519625 676 ntBASIC7.09□□□□□ -1.27
RNF43Q68DV7 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC7.09□□□□□ -1.27
RNF43Q68DV7 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC7.09□□□□□ -1.27
RNF43Q68DV7 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.09□□□□□ -1.27
RNF43Q68DV7 AC009729.1-201ENST00000548873 1133 ntBASIC7.09□□□□□ -1.27
RNF43Q68DV7 TPRKBP2-201ENST00000565969 475 ntBASIC7.09□□□□□ -1.27
RNF43Q68DV7 AC106734.1-201ENST00000568646 663 ntBASIC7.09□□□□□ -1.27
RNF43Q68DV7 AC079171.1-201ENST00000568788 914 ntBASIC7.09□□□□□ -1.27
RNF43Q68DV7 MRPS21P9-201ENST00000571150 257 ntBASIC7.09□□□□□ -1.27
RNF43Q68DV7 MIR378C-201ENST00000578683 81 ntBASIC7.09□□□□□ -1.27
RNF43Q68DV7 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF43Q68DV7 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF43Q68DV7 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF43Q68DV7 AC067852.5-201ENST00000589299 310 ntBASIC7.09□□□□□ -1.27
RNF43Q68DV7 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF43Q68DV7 AP000907.4-201ENST00000604143 237 ntBASIC7.09□□□□□ -1.27
RNF43Q68DV7 IMMP1LP1-201ENST00000605170 488 ntBASIC7.09□□□□□ -1.27
RNF43Q68DV7 MIR6071-201ENST00000616741 78 ntBASIC7.09□□□□□ -1.27
RNF43Q68DV7 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC7.09□□□□□ -1.27
RNF43Q68DV7 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
RNF43Q68DV7 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.09□□□□□ -1.27
RNF43Q68DV7 AC022905.1-201ENST00000503430 3048 ntBASIC7.09□□□□□ -1.27
RNF43Q68DV7 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF43Q68DV7 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.09□□□□□ -1.27
RNF43Q68DV7 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF43Q68DV7 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF43Q68DV7 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RNF43Q68DV7 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF43Q68DV7 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.28
RNF43Q68DV7 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.09□□□□□ -1.28
RNF43Q68DV7 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF43Q68DV7 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF43Q68DV7 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF43Q68DV7 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF43Q68DV7 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 RN7SKP15-201ENST00000364742 309 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 RN7SKP47-201ENST00000365347 328 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 RNU6-1005P-201ENST00000384519 107 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 RNU4-64P-201ENST00000410795 131 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 ISCA1P1-201ENST00000426679 387 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 AC097721.1-201ENST00000427150 1253 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 AC010975.2-201ENST00000427781 588 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 MTCO1P45-201ENST00000431457 267 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms