Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.12□□□□□ -1.59
CACNA1BQ00975 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.12□□□□□ -1.59
CACNA1BQ00975 AL356218.2-201ENST00000605264 187 ntBASIC5.12□□□□□ -1.59
CACNA1BQ00975 AP003400.2-201ENST00000624036 666 ntBASIC5.12□□□□□ -1.59
CACNA1BQ00975 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.12□□□□□ -1.59
CACNA1BQ00975 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CACNA1BQ00975 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CACNA1BQ00975 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CACNA1BQ00975 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CACNA1BQ00975 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.11□□□□□ -1.59
CACNA1BQ00975 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CACNA1BQ00975 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CACNA1BQ00975 SNORA17.1-201ENST00000362945 126 ntBASIC5.11□□□□□ -1.59
CACNA1BQ00975 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CACNA1BQ00975 SNORA70C-201ENST00000384538 135 ntBASIC5.11□□□□□ -1.59
CACNA1BQ00975 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CACNA1BQ00975 RNU4-25P-201ENST00000410569 230 ntBASIC5.11□□□□□ -1.59
CACNA1BQ00975 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.11□□□□□ -1.59
CACNA1BQ00975 TMEM183AP1-205ENST00000432739 290 ntBASIC5.11□□□□□ -1.59
CACNA1BQ00975 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.11□□□□□ -1.59
CACNA1BQ00975 AC006967.1-201ENST00000467608 589 ntBASIC5.11□□□□□ -1.59
CACNA1BQ00975 NPM1P27-201ENST00000502784 830 ntBASIC5.11□□□□□ -1.59
CACNA1BQ00975 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.11□□□□□ -1.59
CACNA1BQ00975 MTCO1P35-201ENST00000515270 228 ntBASIC5.11□□□□□ -1.59
CACNA1BQ00975 RNU1-45P-201ENST00000517191 141 ntBASIC5.11□□□□□ -1.59
CACNA1BQ00975 AC093014.1-201ENST00000548926 724 ntBASIC5.11□□□□□ -1.59
CACNA1BQ00975 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.11□□□□□ -1.59
CACNA1BQ00975 AC244100.1-202ENST00000621554 382 ntBASIC5.11□□□□□ -1.59
CACNA1BQ00975 AC015660.5-201ENST00000623238 564 ntBASIC5.11□□□□□ -1.59
CACNA1BQ00975 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
CACNA1BQ00975 AC105749.1-201ENST00000631338 2008 ntBASIC5.11□□□□□ -1.59
CACNA1BQ00975 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CACNA1BQ00975 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.11□□□□□ -1.59
CACNA1BQ00975 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CACNA1BQ00975 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.11□□□□□ -1.59
CACNA1BQ00975 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CACNA1BQ00975 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CACNA1BQ00975 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.11□□□□□ -1.59
CACNA1BQ00975 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.11□□□□□ -1.59
CACNA1BQ00975 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CACNA1BQ00975 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CACNA1BQ00975 AC096921.2-201ENST00000561507 1916 ntBASIC5.11□□□□□ -1.59
CACNA1BQ00975 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.11□□□□□ -1.59
CACNA1BQ00975 AL162456.1-201ENST00000634535 2006 ntBASIC5.11□□□□□ -1.59
CACNA1BQ00975 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CACNA1BQ00975 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CACNA1BQ00975 RNA5SP455-201ENST00000365190 119 ntBASIC5.11□□□□□ -1.59
CACNA1BQ00975 RPL10P10-201ENST00000403509 664 ntBASIC5.11□□□□□ -1.59
CACNA1BQ00975 MYL6P5-201ENST00000412707 459 ntBASIC5.11□□□□□ -1.59
CACNA1BQ00975 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.11□□□□□ -1.59
CACNA1BQ00975 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.11□□□□□ -1.59
CACNA1BQ00975 MGAT2P1-201ENST00000449718 797 ntBASIC5.11□□□□□ -1.59
CACNA1BQ00975 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.11□□□□□ -1.59
CACNA1BQ00975 RN7SL542P-201ENST00000467147 294 ntBASIC5.11□□□□□ -1.59
CACNA1BQ00975 SLC25A14P1-201ENST00000502867 901 ntBASIC5.11□□□□□ -1.59
CACNA1BQ00975 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.11□□□□□ -1.59
CACNA1BQ00975 SNORA74D-201ENST00000516404 141 ntBASIC5.11□□□□□ -1.59
CACNA1BQ00975 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.11□□□□□ -1.59
CACNA1BQ00975 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CACNA1BQ00975 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.11□□□□□ -1.59
CACNA1BQ00975 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.11□□□□□ -1.59
CACNA1BQ00975 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CACNA1BQ00975 CCT8P1-201ENST00000413611 1657 ntBASIC5.11□□□□□ -1.59
CACNA1BQ00975 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.1□□□□□ -1.59
CACNA1BQ00975 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CACNA1BQ00975 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC5.1□□□□□ -1.59
CACNA1BQ00975 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CACNA1BQ00975 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.1□□□□□ -1.59
CACNA1BQ00975 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CACNA1BQ00975 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.1□□□□□ -1.59
CACNA1BQ00975 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CACNA1BQ00975 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.1□□□□□ -1.59
CACNA1BQ00975 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CACNA1BQ00975 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CACNA1BQ00975 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CACNA1BQ00975 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CACNA1BQ00975 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CACNA1BQ00975 AC015813.6-201ENST00000624409 5808 ntBASIC5.1□□□□□ -1.59
CACNA1BQ00975 RNU4-39P-201ENST00000362455 127 ntBASIC5.1□□□□□ -1.59
CACNA1BQ00975 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.1□□□□□ -1.59
CACNA1BQ00975 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.1□□□□□ -1.59
CACNA1BQ00975 RPL6P5-201ENST00000445678 828 ntBASIC5.1□□□□□ -1.59
CACNA1BQ00975 GAPDHP25-201ENST00000447061 1001 ntBASIC5.1□□□□□ -1.59
CACNA1BQ00975 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.1□□□□□ -1.59
CACNA1BQ00975 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.1□□□□□ -1.59
CACNA1BQ00975 AC060766.1-201ENST00000590824 627 ntBASIC5.1□□□□□ -1.59
CACNA1BQ00975 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.1□□□□□ -1.59
CACNA1BQ00975 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.1□□□□□ -1.59
CACNA1BQ00975 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CACNA1BQ00975 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CACNA1BQ00975 AL512310.3-201ENST00000547023 1335 ntBASIC5.1□□□□□ -1.59
CACNA1BQ00975 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CACNA1BQ00975 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CACNA1BQ00975 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
CACNA1BQ00975 AC120036.2-201ENST00000509729 1474 ntBASIC5.1□□□□□ -1.59
CACNA1BQ00975 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CACNA1BQ00975 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CACNA1BQ00975 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.09□□□□□ -1.59
CACNA1BQ00975 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CACNA1BQ00975 IGKV7-3-201ENST00000357453 298 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms