Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RFC3P40938 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFC3P40938 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RFC3P40938 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.05□□□□□ -1.6
RFC3P40938 RN7SKP6-201ENST00000364795 319 ntBASIC5.05□□□□□ -1.6
RFC3P40938 MIR1286-201ENST00000408112 78 ntBASIC5.05□□□□□ -1.6
RFC3P40938 RPSAP35-201ENST00000413753 818 ntBASIC5.05□□□□□ -1.6
RFC3P40938 AC138761.5-201ENST00000433967 325 ntBASIC5.05□□□□□ -1.6
RFC3P40938 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.05□□□□□ -1.6
RFC3P40938 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.05□□□□□ -1.6
RFC3P40938 RPS26P41-201ENST00000450370 284 ntBASIC5.05□□□□□ -1.6
RFC3P40938 AURKAPS1-201ENST00000451805 1212 ntBASIC5.05□□□□□ -1.6
RFC3P40938 RSU1P1-201ENST00000453416 441 ntBASIC5.05□□□□□ -1.6
RFC3P40938 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.05□□□□□ -1.6
RFC3P40938 AC026348.1-201ENST00000462549 1053 ntBASIC5.05□□□□□ -1.6
RFC3P40938 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.05□□□□□ -1.6
RFC3P40938 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.05□□□□□ -1.6
RFC3P40938 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.05□□□□□ -1.6
RFC3P40938 AP005403.1-201ENST00000579720 229 ntBASIC5.05□□□□□ -1.6
RFC3P40938 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.05□□□□□ -1.6
RFC3P40938 HIRAP1-201ENST00000605318 787 ntBASIC5.05□□□□□ -1.6
RFC3P40938 AC211433.2-201ENST00000608433 387 ntBASIC5.05□□□□□ -1.6
RFC3P40938 MIR6837-201ENST00000620884 64 ntBASIC5.05□□□□□ -1.6
RFC3P40938 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.05□□□□□ -1.6
RFC3P40938 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.05□□□□□ -1.6
RFC3P40938 AC073869.7-201ENST00000640874 297 ntBASIC5.05□□□□□ -1.6
RFC3P40938 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.05□□□□□ -1.6
RFC3P40938 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
RFC3P40938 AL022311.1-201ENST00000623726 19416 ntBASIC5.05□□□□□ -1.6
RFC3P40938 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RFC3P40938 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFC3P40938 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
RFC3P40938 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.05□□□□□ -1.6
RFC3P40938 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RFC3P40938 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RFC3P40938 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RFC3P40938 AL138820.1-201ENST00000617901 5305 ntBASIC5.04□□□□□ -1.6
RFC3P40938 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RFC3P40938 PABPC1P6-201ENST00000445594 1829 ntBASIC5.04□□□□□ -1.6
RFC3P40938 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RFC3P40938 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RFC3P40938 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RFC3P40938 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.04□□□□□ -1.6
RFC3P40938 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RFC3P40938 AL590763.1-201ENST00000398297 1545 ntBASIC5.04□□□□□ -1.6
RFC3P40938 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.04□□□□□ -1.6
RFC3P40938 GVINP1-202ENST00000531871 7271 ntBASIC5.04□□□□□ -1.6
RFC3P40938 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RFC3P40938 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.04□□□□□ -1.6
RFC3P40938 MIR551A-201ENST00000385042 96 ntBASIC5.04□□□□□ -1.6
RFC3P40938 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.04□□□□□ -1.6
RFC3P40938 CBX1P3-201ENST00000413296 527 ntBASIC5.04□□□□□ -1.6
RFC3P40938 AL133325.1-201ENST00000421090 382 ntBASIC5.04□□□□□ -1.6
RFC3P40938 HSPE1P16-201ENST00000426640 348 ntBASIC5.04□□□□□ -1.6
RFC3P40938 AC073410.1-201ENST00000435125 589 ntBASIC5.04□□□□□ -1.6
RFC3P40938 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RFC3P40938 RPL7P45-201ENST00000455851 743 ntBASIC5.04□□□□□ -1.6
RFC3P40938 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.04□□□□□ -1.6
RFC3P40938 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RFC3P40938 RN7SL30P-201ENST00000488416 306 ntBASIC5.04□□□□□ -1.6
RFC3P40938 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RFC3P40938 AC024558.1-201ENST00000505008 528 ntBASIC5.04□□□□□ -1.6
RFC3P40938 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.04□□□□□ -1.6
RFC3P40938 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.04□□□□□ -1.6
RFC3P40938 AC078878.1-201ENST00000539832 958 ntBASIC5.04□□□□□ -1.6
RFC3P40938 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.04□□□□□ -1.6
RFC3P40938 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.04□□□□□ -1.6
RFC3P40938 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.04□□□□□ -1.6
RFC3P40938 AL512329.2-201ENST00000607350 548 ntBASIC5.04□□□□□ -1.6
RFC3P40938 AC016769.4-201ENST00000616893 535 ntBASIC5.04□□□□□ -1.6
RFC3P40938 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.04□□□□□ -1.6
RFC3P40938 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.04□□□□□ -1.6
RFC3P40938 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RFC3P40938 HSPD1P7-201ENST00000447985 1686 ntBASIC5.04□□□□□ -1.6
RFC3P40938 AC092376.2-201ENST00000622621 4116 ntBASIC5.04□□□□□ -1.6
RFC3P40938 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RFC3P40938 AC104260.2-201ENST00000623551 3497 ntBASIC5.04□□□□□ -1.6
RFC3P40938 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RFC3P40938 MT-RNR2-201ENST00000387347 1559 ntBASIC5.04□□□□□ -1.6
RFC3P40938 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RFC3P40938 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.03□□□□□ -1.6
RFC3P40938 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFC3P40938 AC005005.4-201ENST00000623789 16698 ntBASIC5.03□□□□□ -1.6
RFC3P40938 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFC3P40938 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.03□□□□□ -1.6
RFC3P40938 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RFC3P40938 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.03□□□□□ -1.6
RFC3P40938 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RFC3P40938 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RFC3P40938 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RFC3P40938 RN7SKP74-201ENST00000362849 309 ntBASIC5.03□□□□□ -1.6
RFC3P40938 RNU1-19P-201ENST00000363306 165 ntBASIC5.03□□□□□ -1.6
RFC3P40938 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RFC3P40938 AL009179.1-201ENST00000406085 265 ntBASIC5.03□□□□□ -1.6
RFC3P40938 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.03□□□□□ -1.6
RFC3P40938 AC016769.2-201ENST00000414815 475 ntBASIC5.03□□□□□ -1.6
RFC3P40938 NANOGP4-201ENST00000427230 913 ntBASIC5.03□□□□□ -1.6
RFC3P40938 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.03□□□□□ -1.6
RFC3P40938 TMEM183AP1-205ENST00000432739 290 ntBASIC5.03□□□□□ -1.6
RFC3P40938 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms