Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP24386 AC024884.1-201ENST00000620583 399 ntBASIC5.53□□□□□ -1.52
CHMP24386 AC073488.3-201ENST00000631611 778 ntBASIC5.53□□□□□ -1.52
CHMP24386 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
CHMP24386 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP24386 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP24386 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP24386 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.53□□□□□ -1.52
CHMP24386 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP24386 RBMY1HP-201ENST00000382759 1389 ntBASIC5.53□□□□□ -1.52
CHMP24386 AL354854.1-201ENST00000455940 1363 ntBASIC5.53□□□□□ -1.52
CHMP24386 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.53□□□□□ -1.52
CHMP24386 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CHMP24386 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.52□□□□□ -1.53
CHMP24386 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP24386 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.52□□□□□ -1.53
CHMP24386 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP24386 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP24386 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CHMP24386 AC004076.2-201ENST00000620532 3323 ntBASIC5.52□□□□□ -1.53
CHMP24386 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.52□□□□□ -1.53
CHMP24386 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP24386 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP24386 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.52□□□□□ -1.53
CHMP24386 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP24386 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP24386 RNA5SP375-201ENST00000362975 119 ntBASIC5.52□□□□□ -1.53
CHMP24386 RNU105B-201ENST00000364478 208 ntBASIC5.52□□□□□ -1.53
CHMP24386 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CHMP24386 RNU6-225P-201ENST00000384613 103 ntBASIC5.52□□□□□ -1.53
CHMP24386 HMGB1P10-201ENST00000395823 563 ntBASIC5.52□□□□□ -1.53
CHMP24386 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP24386 RPS27AP11-201ENST00000402798 447 ntBASIC5.52□□□□□ -1.53
CHMP24386 RNU2-17P-201ENST00000410290 190 ntBASIC5.52□□□□□ -1.53
CHMP24386 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.52□□□□□ -1.53
CHMP24386 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP24386 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP24386 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.52□□□□□ -1.53
CHMP24386 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP24386 AC115283.1-201ENST00000427353 400 ntBASIC5.52□□□□□ -1.53
CHMP24386 KCTD9P1-201ENST00000430462 1167 ntBASIC5.52□□□□□ -1.53
CHMP24386 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5.52□□□□□ -1.53
CHMP24386 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.52□□□□□ -1.53
CHMP24386 EIF5AP4-201ENST00000441206 465 ntBASIC5.52□□□□□ -1.53
CHMP24386 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP24386 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.52□□□□□ -1.53
CHMP24386 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.52□□□□□ -1.53
CHMP24386 FTLP8-201ENST00000446770 267 ntBASIC5.52□□□□□ -1.53
CHMP24386 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP24386 ACA64.4-201ENST00000459070 127 ntBASIC5.52□□□□□ -1.53
CHMP24386 NDUFA5P5-201ENST00000468361 342 ntBASIC5.52□□□□□ -1.53
CHMP24386 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.52□□□□□ -1.53
CHMP24386 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.52□□□□□ -1.53
CHMP24386 RNU6-1004P-201ENST00000516584 111 ntBASIC5.52□□□□□ -1.53
CHMP24386 AC008083.2-201ENST00000546707 476 ntBASIC5.52□□□□□ -1.53
CHMP24386 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.52□□□□□ -1.53
CHMP24386 RPA2P1-201ENST00000556557 721 ntBASIC5.52□□□□□ -1.53
CHMP24386 AC019322.1-201ENST00000571869 389 ntBASIC5.52□□□□□ -1.53
CHMP24386 AC020978.7-201ENST00000575953 1187 ntBASIC5.52□□□□□ -1.53
CHMP24386 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.52□□□□□ -1.53
CHMP24386 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.52□□□□□ -1.53
CHMP24386 AC090236.2-201ENST00000587933 1101 ntBASIC5.52□□□□□ -1.53
CHMP24386 AC006115.2-201ENST00000596823 202 ntBASIC5.52□□□□□ -1.53
CHMP24386 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.52□□□□□ -1.53
CHMP24386 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.52□□□□□ -1.53
CHMP24386 AC068768.2-201ENST00000602352 343 ntBASIC5.52□□□□□ -1.53
CHMP24386 AL645933.2-201ENST00000606743 1207 ntBASIC5.52□□□□□ -1.53
CHMP24386 Z95327.3-201ENST00000610385 572 ntBASIC5.52□□□□□ -1.53
CHMP24386 AC011472.4-201ENST00000615848 491 ntBASIC5.52□□□□□ -1.53
CHMP24386 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP24386 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP24386 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CHMP24386 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP24386 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP24386 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP24386 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.52□□□□□ -1.53
CHMP24386 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHMP24386 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.51□□□□□ -1.53
CHMP24386 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHMP24386 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHMP24386 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CHMP24386 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHMP24386 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CHMP24386 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.51□□□□□ -1.53
CHMP24386 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.51□□□□□ -1.53
CHMP24386 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHMP24386 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHMP24386 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHMP24386 RNU6-792P-201ENST00000363490 107 ntBASIC5.51□□□□□ -1.53
CHMP24386 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHMP24386 MIR130B-202ENST00000385018 82 ntBASIC5.51□□□□□ -1.53
CHMP24386 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHMP24386 AC010385.1-201ENST00000412374 256 ntBASIC5.51□□□□□ -1.53
CHMP24386 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.51□□□□□ -1.53
CHMP24386 RPS15AP30-201ENST00000420976 390 ntBASIC5.51□□□□□ -1.53
CHMP24386 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.51□□□□□ -1.53
CHMP24386 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CHMP24386 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.51□□□□□ -1.53
CHMP24386 ATP5LP2-201ENST00000440646 311 ntBASIC5.51□□□□□ -1.53
CHMP24386 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms