Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH3P22223 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH3P22223 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH3P22223 AP000281.1-201ENST00000444036 316 ntBASIC5.52□□□□□ -1.53
CDH3P22223 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH3P22223 RAD1P2-201ENST00000446414 663 ntBASIC5.52□□□□□ -1.53
CDH3P22223 NDUFA5P8-201ENST00000449019 346 ntBASIC5.52□□□□□ -1.53
CDH3P22223 MEMO1P4-201ENST00000453590 386 ntBASIC5.52□□□□□ -1.53
CDH3P22223 RPS27AP2-201ENST00000457576 465 ntBASIC5.52□□□□□ -1.53
CDH3P22223 RPS23P2-201ENST00000463671 415 ntBASIC5.52□□□□□ -1.53
CDH3P22223 RN7SL197P-201ENST00000466981 299 ntBASIC5.52□□□□□ -1.53
CDH3P22223 AC087672.1-201ENST00000479876 766 ntBASIC5.52□□□□□ -1.53
CDH3P22223 RN7SL570P-201ENST00000484405 292 ntBASIC5.52□□□□□ -1.53
CDH3P22223 AL136038.1-201ENST00000497246 351 ntBASIC5.52□□□□□ -1.53
CDH3P22223 AC011411.1-201ENST00000509592 876 ntBASIC5.52□□□□□ -1.53
CDH3P22223 TOMM22P4-201ENST00000511318 336 ntBASIC5.52□□□□□ -1.53
CDH3P22223 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.52□□□□□ -1.53
CDH3P22223 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH3P22223 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH3P22223 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH3P22223 AC067805.1-201ENST00000559344 470 ntBASIC5.52□□□□□ -1.53
CDH3P22223 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH3P22223 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
CDH3P22223 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH3P22223 SNORD95-201ENST00000579879 68 ntBASIC5.52□□□□□ -1.53
CDH3P22223 FO393422.1-201ENST00000603908 708 ntBASIC5.52□□□□□ -1.53
CDH3P22223 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH3P22223 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH3P22223 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH3P22223 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
CDH3P22223 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
CDH3P22223 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CDH3P22223 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH3P22223 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH3P22223 AC092376.2-201ENST00000622621 4116 ntBASIC5.51□□□□□ -1.53
CDH3P22223 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH3P22223 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
CDH3P22223 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.51□□□□□ -1.53
CDH3P22223 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
CDH3P22223 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH3P22223 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH3P22223 AL031595.2-201ENST00000624215 19071 ntBASIC5.51□□□□□ -1.53
CDH3P22223 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH3P22223 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CDH3P22223 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH3P22223 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CDH3P22223 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH3P22223 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.51□□□□□ -1.53
CDH3P22223 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CDH3P22223 MTND3P20-201ENST00000407663 186 ntBASIC5.51□□□□□ -1.53
CDH3P22223 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH3P22223 METTL15P3-201ENST00000415522 1221 ntBASIC5.51□□□□□ -1.53
CDH3P22223 NIFKP3-201ENST00000417799 865 ntBASIC5.51□□□□□ -1.53
CDH3P22223 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH3P22223 AC005297.1-201ENST00000444765 862 ntBASIC5.51□□□□□ -1.53
CDH3P22223 AC002553.2-201ENST00000453217 340 ntBASIC5.51□□□□□ -1.53
CDH3P22223 RPS4XP12-201ENST00000461747 709 ntBASIC5.51□□□□□ -1.53
CDH3P22223 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
CDH3P22223 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH3P22223 AC138866.2-201ENST00000508650 584 ntBASIC5.51□□□□□ -1.53
CDH3P22223 MTND2P31-201ENST00000512602 616 ntBASIC5.51□□□□□ -1.53
CDH3P22223 AC021146.10-201ENST00000515628 706 ntBASIC5.51□□□□□ -1.53
CDH3P22223 snoU109.5-201ENST00000516231 132 ntBASIC5.51□□□□□ -1.53
CDH3P22223 RNU6-943P-201ENST00000516960 98 ntBASIC5.51□□□□□ -1.53
CDH3P22223 AP002981.1-201ENST00000517692 975 ntBASIC5.51□□□□□ -1.53
CDH3P22223 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH3P22223 AL121594.2-201ENST00000541658 472 ntBASIC5.51□□□□□ -1.53
CDH3P22223 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH3P22223 LSM3P2-201ENST00000551246 273 ntBASIC5.51□□□□□ -1.53
CDH3P22223 DPPA2P4-201ENST00000563717 878 ntBASIC5.51□□□□□ -1.53
CDH3P22223 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH3P22223 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH3P22223 BX322635.1-201ENST00000605804 496 ntBASIC5.51□□□□□ -1.53
CDH3P22223 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH3P22223 MIR6768-201ENST00000610734 72 ntBASIC5.51□□□□□ -1.53
CDH3P22223 AC008115.3-201ENST00000614874 549 ntBASIC5.51□□□□□ -1.53
CDH3P22223 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH3P22223 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH3P22223 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH3P22223 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
CDH3P22223 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CDH3P22223 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH3P22223 MRE11P1-201ENST00000464884 2127 ntBASIC5.51□□□□□ -1.53
CDH3P22223 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CDH3P22223 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH3P22223 SRRM1P3-201ENST00000426911 2678 ntBASIC5.51□□□□□ -1.53
CDH3P22223 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CDH3P22223 AC093591.2-201ENST00000565254 3843 ntBASIC5.5□□□□□ -1.53
CDH3P22223 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.5□□□□□ -1.53
CDH3P22223 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH3P22223 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CDH3P22223 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CDH3P22223 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDH3P22223 AC093775.1-201ENST00000624154 1868 ntBASIC5.5□□□□□ -1.53
CDH3P22223 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CDH3P22223 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH3P22223 YES1P1-201ENST00000418510 1628 ntBASIC5.5□□□□□ -1.53
CDH3P22223 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH3P22223 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CDH3P22223 RNU6-891P-201ENST00000384280 111 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms