Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AC021483.2-201ENST00000567415 758 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AC090651.1-201ENST00000567865 634 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AC025165.5-201ENST00000602802 578 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AC013244.3-201ENST00000605614 388 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AC211433.2-201ENST00000608433 387 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AL121652.1-201ENST00000608851 448 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AL158062.1-201ENST00000619632 745 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AC079753.1-201ENST00000623243 3868 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 OR9K1P-201ENST00000326513 941 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 SNORA70.9-201ENST00000384370 135 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 BMS1P17-202ENST00000416720 316 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 HYALP1-201ENST00000417674 1279 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 AC127526.2-201ENST00000426436 775 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 AC097721.1-201ENST00000427150 1253 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 AL451136.1-201ENST00000435399 325 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 MTCYBP21-201ENST00000443300 1113 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 RPL23AP60-201ENST00000450011 454 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 RPS26P41-201ENST00000450370 284 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 snoU109.3-201ENST00000459477 145 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 LARP7P4-201ENST00000481075 878 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 AC098862.1-201ENST00000504991 413 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 IGBP1P1-201ENST00000554337 1009 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 AGGF1P9-201ENST00000561884 913 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 AL049838.1-201ENST00000563647 981 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 AC090666.1-201ENST00000578241 445 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 MIR3189-201ENST00000578735 73 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 RNU4ATAC-201ENST00000580972 127 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 AC124283.4-201ENST00000581815 456 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 CBX3P2-202ENST00000583365 535 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 MTCO2P22-201ENST00000603246 681 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 AC073137.1-201ENST00000605636 634 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 AC021851.1-201ENST00000608537 1082 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 AC079395.2-201ENST00000610982 737 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 RN7SL544P-201ENST00000617232 284 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 RN7SL763P-201ENST00000620922 284 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 AC087565.3-203ENST00000641018 837 ntBASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CCDC187A0A096LP49 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms