Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC100757.1-201ENST00000616872 1835 ntBASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 MAPK10-286ENST00000641208 8747 ntBASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 HSPD1P9-201ENST00000420325 1636 ntBASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 PDZK1P1-202ENST00000425209 1350 ntBASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 AC007618.1-201ENST00000366455 732 ntBASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 CASKP1-201ENST00000412870 582 ntBASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 RPS6P23-201ENST00000413224 722 ntBASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 AC092601.1-201ENST00000444526 383 ntBASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 CYCSP24-201ENST00000445119 316 ntBASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 RPS7P10-201ENST00000464254 603 ntBASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 AC022133.1-201ENST00000490961 571 ntBASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 RPS24P16-201ENST00000497294 392 ntBASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 EIF3KP3-201ENST00000514461 639 ntBASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 HMGN1P9-201ENST00000515212 298 ntBASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 MTCYBP13-201ENST00000578634 1093 ntBASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 MIR4701-201ENST00000583094 63 ntBASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 AC000374.1-201ENST00000434698 1745 ntBASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 AC008627.1-201ENST00000517511 1704 ntBASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 RNU6-1263P-201ENST00000384601 106 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 RNU6-1320P-201ENST00000390838 107 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 RNU6-1269P-201ENST00000391139 107 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 ARSFP1-201ENST00000398758 477 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 AL358176.3-201ENST00000420757 454 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 FAM183DP-201ENST00000421987 399 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 AC126120.1-201ENST00000431082 470 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 GAPDHP48-201ENST00000436626 961 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 AC090804.1-201ENST00000448870 490 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 PPIAP32-201ENST00000449940 472 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 FCF1P7-201ENST00000451185 558 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 RNU6-599P-201ENST00000459383 107 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 RNU6-1193P-201ENST00000459461 107 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 RN7SL254P-201ENST00000460609 284 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 AC063955.1-201ENST00000462872 685 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 AC105918.1-201ENST00000474399 838 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 AC073610.1-201ENST00000489971 396 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 RPS27P20-201ENST00000492051 246 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 IGBP1P4-201ENST00000503202 879 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 UGT2A3P7-201ENST00000510485 734 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 AP003396.4-201ENST00000527574 265 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 RPA2P1-201ENST00000556557 721 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 MIR4776-2-201ENST00000580204 80 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 RN7SL657P-201ENST00000582431 293 ntBASIC4.57□□□□□ -1.68
KCNIP3Q9Y2W7 PRPF19P1-201ENST00000584766 898 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms