Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 MTND4LP17-201ENST00000414607 293 ntBASIC7.84□□□□□ -1.15
SHANK2Q9UPX8 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC7.84□□□□□ -1.15
SHANK2Q9UPX8 RPS23P7-201ENST00000466210 444 ntBASIC7.84□□□□□ -1.15
SHANK2Q9UPX8 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC7.84□□□□□ -1.15
SHANK2Q9UPX8 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC7.84□□□□□ -1.15
SHANK2Q9UPX8 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC7.84□□□□□ -1.15
SHANK2Q9UPX8 AC079414.3-201ENST00000612986 1090 ntBASIC7.84□□□□□ -1.15
SHANK2Q9UPX8 AC073575.2-201ENST00000614212 627 ntBASIC7.84□□□□□ -1.15
SHANK2Q9UPX8 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.15
SHANK2Q9UPX8 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SHANK2Q9UPX8 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SHANK2Q9UPX8 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
SHANK2Q9UPX8 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
SHANK2Q9UPX8 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC7.84□□□□□ -1.15
SHANK2Q9UPX8 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SHANK2Q9UPX8 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
SHANK2Q9UPX8 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
SHANK2Q9UPX8 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 AC015799.1-201ENST00000622996 3122 ntBASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 MIPEPP2-201ENST00000422560 1819 ntBASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 CYP2AC1P-201ENST00000407830 1173 ntBASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 TAAR4P-201ENST00000454843 1039 ntBASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 snoU13.20-201ENST00000459180 104 ntBASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 RN7SL354P-201ENST00000469282 294 ntBASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 AL392048.1-201ENST00000613946 534 ntBASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK2Q9UPX8 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
SHANK2Q9UPX8 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHANK2Q9UPX8 OR9G4-201ENST00000302957 984 ntBASIC7.82□□□□□ -1.16
SHANK2Q9UPX8 RNA5SP90-201ENST00000364801 99 ntBASIC7.82□□□□□ -1.16
SHANK2Q9UPX8 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHANK2Q9UPX8 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
SHANK2Q9UPX8 DNAJC19P7-201ENST00000428811 344 ntBASIC7.82□□□□□ -1.16
SHANK2Q9UPX8 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC7.82□□□□□ -1.16
SHANK2Q9UPX8 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC7.82□□□□□ -1.16
SHANK2Q9UPX8 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC7.82□□□□□ -1.16
SHANK2Q9UPX8 RNA5SP43-201ENST00000516559 110 ntBASIC7.82□□□□□ -1.16
SHANK2Q9UPX8 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC7.82□□□□□ -1.16
SHANK2Q9UPX8 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC7.82□□□□□ -1.16
SHANK2Q9UPX8 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SHANK2Q9UPX8 MIR4270-201ENST00000581799 70 ntBASIC7.82□□□□□ -1.16
SHANK2Q9UPX8 AC005618.4-201ENST00000625053 554 ntBASIC7.82□□□□□ -1.16
SHANK2Q9UPX8 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHANK2Q9UPX8 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHANK2Q9UPX8 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SHANK2Q9UPX8 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.82□□□□□ -1.16
SHANK2Q9UPX8 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
SHANK2Q9UPX8 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SHANK2Q9UPX8 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC7.82□□□□□ -1.16
SHANK2Q9UPX8 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC7.82□□□□□ -1.16
SHANK2Q9UPX8 SAMM50P1-201ENST00000455403 1399 ntBASIC7.82□□□□□ -1.16
SHANK2Q9UPX8 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 AC007064.3-201ENST00000422608 359 ntBASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 AC239367.2-201ENST00000447309 705 ntBASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 AC026979.1-201ENST00000492525 396 ntBASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 SLC25A15P5-201ENST00000508033 253 ntBASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 OR8Q1P-201ENST00000526467 655 ntBASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 EDDM3DP-201ENST00000554692 434 ntBASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 uc_338.7-201ENST00000621834 124 ntBASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 AC099654.6-201ENST00000636487 512 ntBASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms