Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 CUL4AP1-201ENST00000514750 1863 ntBASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 ZNF652P1-201ENST00000442420 1309 ntBASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 MIR137-201ENST00000385223 102 ntBASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 MRPL53P1-201ENST00000414323 319 ntBASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 AC066692.1-201ENST00000421721 457 ntBASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 VN1R96P-201ENST00000446052 858 ntBASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 AL596266.1-201ENST00000448132 400 ntBASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 AC239798.3-201ENST00000454459 408 ntBASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 AP006245.2-201ENST00000522004 300 ntBASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 AC134669.1-201ENST00000581275 672 ntBASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 AL096712.1-201ENST00000614561 159 ntBASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 FO681491.1-202ENST00000623392 737 ntBASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 SMG1P7-201ENST00000565246 2704 ntBASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.05□□□□□ -1.6
CCNB1IP1Q9NPC3 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 AL034549.2-201ENST00000618285 3373 ntBASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 AC000374.1-201ENST00000434698 1745 ntBASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 AL357752.1-201ENST00000412817 349 ntBASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 RPL12P9-201ENST00000412942 488 ntBASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 PTP4A1P1-201ENST00000420539 515 ntBASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 AC090018.1-201ENST00000434369 367 ntBASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 HLA-DPA3-207ENST00000454398 229 ntBASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 RPS12P31-201ENST00000491419 398 ntBASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 IGBP1P4-201ENST00000503202 879 ntBASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 HMGN1P9-201ENST00000515212 298 ntBASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 SNORA70.20-201ENST00000516848 126 ntBASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 SCARNA6.1-201ENST00000516989 238 ntBASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 AC100784.1-201ENST00000522790 310 ntBASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 AC068305.2-201ENST00000550567 1205 ntBASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 AC234775.3-201ENST00000564612 656 ntBASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 AC114947.2-201ENST00000565748 2125 ntBASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 MIR4311-201ENST00000580794 100 ntBASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms