Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
USB1Q9BQ65 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
USB1Q9BQ65 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
USB1Q9BQ65 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 UBAP2L-202ENST00000343815 3411 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
USB1Q9BQ65 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
USB1Q9BQ65 ZNF615-208ENST00000598071 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
USB1Q9BQ65 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 MEF2C-221ENST00000514015 2772 ntTSL 5 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
USB1Q9BQ65 AL078621.1-201ENST00000272567 768 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 RNU6-108P-201ENST00000365558 107 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 S100A8-202ENST00000368733 523 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
USB1Q9BQ65 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 CCNYL3-201ENST00000407030 998 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 AC127526.1-201ENST00000417526 366 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 UQCRBP1-201ENST00000421129 336 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 TMEM211-202ENST00000423535 695 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
USB1Q9BQ65 RPL3P8-201ENST00000432928 1191 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 RPS28P8-201ENST00000435020 208 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 RPS3AP52-201ENST00000435639 297 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 AL359711.1-201ENST00000441999 123 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 AL137792.2-201ENST00000443484 235 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 AC104651.2-201ENST00000447549 528 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 GAPDHP14-201ENST00000450472 937 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 RPL37P3-201ENST00000456825 293 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 RPL7P22-201ENST00000466005 733 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 GGTA1P-204ENST00000488429 1104 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 AC024558.1-201ENST00000505008 528 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 LINC01948-201ENST00000506836 656 ntTSL 2 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 RPL37-205ENST00000509877 637 ntTSL 5 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 CDV3-208ENST00000511392 554 ntTSL 5 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 AC079031.2-201ENST00000537742 615 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 AL110292.1-202ENST00000552303 568 ntTSL 4 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 AL845552.1-201ENST00000556820 323 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 AC013452.1-201ENST00000560630 598 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 AC078905.1-201ENST00000560803 509 ntTSL 3 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 AC127029.1-201ENST00000560822 237 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 AC007952.7-201ENST00000583141 757 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 SRP68P1-201ENST00000584247 269 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 AC174071.1-201ENST00000603069 517 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 TRBV10-3-201ENST00000611462 368 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 AC243830.3-201ENST00000616810 376 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 AC090510.2-201ENST00000617465 629 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 AC005899.7-201ENST00000618199 588 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 LINC01620-205ENST00000637248 546 ntTSL 4 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
USB1Q9BQ65 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
USB1Q9BQ65 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
USB1Q9BQ65 MXRA7-207ENST00000592148 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
USB1Q9BQ65 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
USB1Q9BQ65 ELK3-201ENST00000228741 4205 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
USB1Q9BQ65 AL158206.1-201ENST00000563205 1965 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
USB1Q9BQ65 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 OR2AH1P-202ENST00000641232 2744 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 CWC27-204ENST00000508024 2103 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
USB1Q9BQ65 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
USB1Q9BQ65 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 MAPK10-290ENST00000641237 2826 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 AC130360.2-201ENST00000533477 1556 ntBASIC7.42□□□□□ -1.22
USB1Q9BQ65 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
USB1Q9BQ65 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USB1Q9BQ65 LIG4-204ENST00000611712 4180 ntAPPRIS P1 TSL 4 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 GNAI1-205ENST00000457358 1633 ntTSL 2 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USB1Q9BQ65 PLRG1-201ENST00000302078 1673 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
USB1Q9BQ65 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
USB1Q9BQ65 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
USB1Q9BQ65 AL137058.3-201ENST00000624531 3099 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 AC009044.1-201ENST00000624577 1798 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 AP001528.3-201ENST00000624364 3249 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 AC005538.2-201ENST00000623215 1864 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 NHSL2-208ENST00000639939 3402 ntTSL 5 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms