Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AC023490.2-201ENST00000359859 470 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 RNU6-386P-201ENST00000362650 107 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 RNU6-792P-201ENST00000363490 107 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 RNU4-28P-201ENST00000364739 141 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 ZNF602P-201ENST00000405929 924 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AL512504.1-201ENST00000415494 778 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 HIGD1AP4-201ENST00000430194 280 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 MTND1P4-201ENST00000435196 415 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 TUBB4BP6-201ENST00000437576 479 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AC016772.1-201ENST00000444170 1261 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 BMI1P1-201ENST00000445879 941 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AL031313.1-201ENST00000448435 256 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AC016027.4-201ENST00000450866 277 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AC073387.1-201ENST00000453261 709 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 MTCYBP14-201ENST00000457471 715 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 GYG1P1-201ENST00000460864 698 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 RPL17P2-201ENST00000491913 451 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 RNU5A-7P-201ENST00000515979 116 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 RN7SKP238-201ENST00000516483 249 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 UBTFL9-201ENST00000534504 1148 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 OSBPL9P3-201ENST00000534523 595 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 MIR4310-201ENST00000582950 57 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AC020916.2-201ENST00000591242 360 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AL022067.1-201ENST00000602426 454 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 MIR6861-201ENST00000618657 64 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AC123767.1-202ENST00000620407 817 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AC018659.2-201ENST00000624690 715 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AC092192.1-201ENST00000633154 1018 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AC012078.1-201ENST00000405035 1646 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC140479.2-201ENST00000421567 3130 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC024587.1-201ENST00000505925 2157 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 RNU4-75P-201ENST00000364621 146 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 SUGT1P2-201ENST00000379452 992 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 RNU6-298P-201ENST00000390888 96 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC233289.1-201ENST00000403700 508 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 TRIM60P9Y-201ENST00000438459 816 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms