Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDK5RAP2Q96SN8 ZNF733P-202ENST00000444809 1573 ntBASIC6.15□□□□□ -1.42
CDK5RAP2Q96SN8 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDK5RAP2Q96SN8 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.15□□□□□ -1.42
CDK5RAP2Q96SN8 HSPD1P12-201ENST00000429127 1069 ntBASIC6.15□□□□□ -1.42
CDK5RAP2Q96SN8 RPL19P16-201ENST00000433839 588 ntBASIC6.15□□□□□ -1.42
CDK5RAP2Q96SN8 OR7E125P-201ENST00000443450 846 ntBASIC6.15□□□□□ -1.42
CDK5RAP2Q96SN8 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.15□□□□□ -1.42
CDK5RAP2Q96SN8 AC079168.1-201ENST00000458741 345 ntBASIC6.15□□□□□ -1.42
CDK5RAP2Q96SN8 RPL7P16-201ENST00000479738 738 ntBASIC6.15□□□□□ -1.42
CDK5RAP2Q96SN8 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.15□□□□□ -1.42
CDK5RAP2Q96SN8 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.15□□□□□ -1.42
CDK5RAP2Q96SN8 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.15□□□□□ -1.42
CDK5RAP2Q96SN8 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.15□□□□□ -1.42
CDK5RAP2Q96SN8 AC007159.1-201ENST00000566529 4706 ntBASIC6.15□□□□□ -1.42
CDK5RAP2Q96SN8 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.15□□□□□ -1.42
CDK5RAP2Q96SN8 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 SNORA56-201ENST00000383966 129 ntBASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 FABP12P1-201ENST00000401911 322 ntBASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 SNORA77-201ENST00000408716 125 ntBASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 MTND2P40-201ENST00000436718 841 ntBASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 AC112498.1-201ENST00000444401 332 ntBASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 AC009963.4-201ENST00000448535 339 ntBASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 snoU13.20-201ENST00000459180 104 ntBASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 RPS17P2-201ENST00000461663 408 ntBASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 MIR6820-201ENST00000611508 62 ntBASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 AC006210.2-201ENST00000367074 1545 ntBASIC6.15□□□□□ -1.43
CDK5RAP2Q96SN8 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 THAP12P4-201ENST00000528321 2266 ntBASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 AL035419.1-201ENST00000397037 564 ntBASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 AC092647.3-201ENST00000443044 633 ntBASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 RN7SL459P-201ENST00000481078 302 ntBASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 AC008897.1-201ENST00000494006 347 ntBASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 HIGD1AP5-201ENST00000529959 259 ntBASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 FAM25E-202ENST00000608562 189 ntBASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 EIF3FP1-201ENST00000613970 806 ntBASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC6.14□□□□□ -1.43
CDK5RAP2Q96SN8 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.13□□□□□ -1.43
CDK5RAP2Q96SN8 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDK5RAP2Q96SN8 RN7SKP149-201ENST00000363008 344 ntBASIC6.13□□□□□ -1.43
CDK5RAP2Q96SN8 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.13□□□□□ -1.43
CDK5RAP2Q96SN8 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.13□□□□□ -1.43
CDK5RAP2Q96SN8 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CDK5RAP2Q96SN8 AC104837.2-201ENST00000427236 424 ntBASIC6.13□□□□□ -1.43
CDK5RAP2Q96SN8 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.13□□□□□ -1.43
CDK5RAP2Q96SN8 AC000111.2-201ENST00000448200 210 ntBASIC6.13□□□□□ -1.43
CDK5RAP2Q96SN8 AC090804.1-201ENST00000448870 490 ntBASIC6.13□□□□□ -1.43
CDK5RAP2Q96SN8 AC009127.1-201ENST00000467090 155 ntBASIC6.13□□□□□ -1.43
CDK5RAP2Q96SN8 RNA5SP392-201ENST00000516905 112 ntBASIC6.13□□□□□ -1.43
CDK5RAP2Q96SN8 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.13□□□□□ -1.43
CDK5RAP2Q96SN8 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.13□□□□□ -1.43
CDK5RAP2Q96SN8 BNIP3P35-201ENST00000604530 490 ntBASIC6.13□□□□□ -1.43
CDK5RAP2Q96SN8 AC011626.1-201ENST00000604710 562 ntBASIC6.13□□□□□ -1.43
CDK5RAP2Q96SN8 MEMO1P5-201ENST00000604810 406 ntBASIC6.13□□□□□ -1.43
CDK5RAP2Q96SN8 AC119674.1-217ENST00000641942 1086 ntBASIC6.13□□□□□ -1.43
CDK5RAP2Q96SN8 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CDK5RAP2Q96SN8 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CDK5RAP2Q96SN8 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms