Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SNED1Q8TER0 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SNED1Q8TER0 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SNED1Q8TER0 AC069542.2-201ENST00000624816 216 ntBASIC6.44□□□□□ -1.38
SNED1Q8TER0 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SNED1Q8TER0 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SNED1Q8TER0 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SNED1Q8TER0 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SNED1Q8TER0 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.44□□□□□ -1.38
SNED1Q8TER0 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SNED1Q8TER0 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
SNED1Q8TER0 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SNED1Q8TER0 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SNED1Q8TER0 AL033543.1-201ENST00000623440 13454 ntBASIC6.44□□□□□ -1.38
SNED1Q8TER0 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SNED1Q8TER0 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SNED1Q8TER0 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SNED1Q8TER0 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SNED1Q8TER0 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.43□□□□□ -1.38
SNED1Q8TER0 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.43□□□□□ -1.38
SNED1Q8TER0 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SNED1Q8TER0 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SNED1Q8TER0 RNA5SP455-201ENST00000365190 119 ntBASIC6.43□□□□□ -1.38
SNED1Q8TER0 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.43□□□□□ -1.38
SNED1Q8TER0 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC6.43□□□□□ -1.38
SNED1Q8TER0 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.43□□□□□ -1.38
SNED1Q8TER0 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.43□□□□□ -1.38
SNED1Q8TER0 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.43□□□□□ -1.38
SNED1Q8TER0 OR4A6P-201ENST00000534364 970 ntBASIC6.43□□□□□ -1.38
SNED1Q8TER0 EDDM3DP-201ENST00000554692 434 ntBASIC6.43□□□□□ -1.38
SNED1Q8TER0 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.43□□□□□ -1.38
SNED1Q8TER0 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.43□□□□□ -1.38
SNED1Q8TER0 AC104687.2-201ENST00000604442 342 ntBASIC6.43□□□□□ -1.38
SNED1Q8TER0 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
SNED1Q8TER0 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SNED1Q8TER0 AC232271.1-201ENST00000602455 2715 ntBASIC6.43□□□□□ -1.38
SNED1Q8TER0 AL359955.1-201ENST00000455242 3275 ntBASIC6.43□□□□□ -1.38
SNED1Q8TER0 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SNED1Q8TER0 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.43□□□□□ -1.38
SNED1Q8TER0 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.43□□□□□ -1.38
SNED1Q8TER0 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.43□□□□□ -1.38
SNED1Q8TER0 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
SNED1Q8TER0 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
SNED1Q8TER0 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNED1Q8TER0 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNED1Q8TER0 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNED1Q8TER0 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.42□□□□□ -1.38
SNED1Q8TER0 RPL7P11-201ENST00000437586 658 ntBASIC6.42□□□□□ -1.38
SNED1Q8TER0 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.42□□□□□ -1.38
SNED1Q8TER0 GAPDHP62-201ENST00000515313 990 ntBASIC6.42□□□□□ -1.38
SNED1Q8TER0 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.42□□□□□ -1.38
SNED1Q8TER0 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.42□□□□□ -1.38
SNED1Q8TER0 MIR4270-201ENST00000581799 70 ntBASIC6.42□□□□□ -1.38
SNED1Q8TER0 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.42□□□□□ -1.38
SNED1Q8TER0 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.42□□□□□ -1.38
SNED1Q8TER0 AP001357.1-201ENST00000586304 1053 ntBASIC6.42□□□□□ -1.38
SNED1Q8TER0 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.42□□□□□ -1.38
SNED1Q8TER0 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.42□□□□□ -1.38
SNED1Q8TER0 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.42□□□□□ -1.38
SNED1Q8TER0 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.42□□□□□ -1.38
SNED1Q8TER0 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
SNED1Q8TER0 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SNED1Q8TER0 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNED1Q8TER0 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNED1Q8TER0 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNED1Q8TER0 AL731532.1-201ENST00000623972 4236 ntBASIC6.42□□□□□ -1.38
SNED1Q8TER0 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNED1Q8TER0 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNED1Q8TER0 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
SNED1Q8TER0 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNED1Q8TER0 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
SNED1Q8TER0 RPL7P56-201ENST00000429441 717 ntBASIC6.42□□□□□ -1.38
SNED1Q8TER0 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.42□□□□□ -1.38
SNED1Q8TER0 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.42□□□□□ -1.38
SNED1Q8TER0 AL606490.8-201ENST00000441624 319 ntBASIC6.42□□□□□ -1.38
SNED1Q8TER0 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.42□□□□□ -1.38
SNED1Q8TER0 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.42□□□□□ -1.38
SNED1Q8TER0 AC079168.1-201ENST00000458741 345 ntBASIC6.42□□□□□ -1.38
SNED1Q8TER0 AC092905.1-201ENST00000467527 949 ntBASIC6.42□□□□□ -1.38
SNED1Q8TER0 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SNED1Q8TER0 RN7SKP67-201ENST00000515905 235 ntBASIC6.42□□□□□ -1.38
SNED1Q8TER0 RNA5SP43-201ENST00000516559 110 ntBASIC6.42□□□□□ -1.38
SNED1Q8TER0 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SNED1Q8TER0 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.42□□□□□ -1.38
SNED1Q8TER0 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.42□□□□□ -1.38
SNED1Q8TER0 AC011487.3-201ENST00000593607 453 ntBASIC6.42□□□□□ -1.38
SNED1Q8TER0 EIF3FP1-201ENST00000613970 806 ntBASIC6.42□□□□□ -1.38
SNED1Q8TER0 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SNED1Q8TER0 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNED1Q8TER0 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.41□□□□□ -1.38
SNED1Q8TER0 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNED1Q8TER0 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.41□□□□□ -1.38
SNED1Q8TER0 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.41□□□□□ -1.38
SNED1Q8TER0 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.41□□□□□ -1.38
SNED1Q8TER0 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNED1Q8TER0 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.41□□□□□ -1.38
SNED1Q8TER0 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNED1Q8TER0 AC034229.2-201ENST00000566945 2508 ntBASIC6.41□□□□□ -1.38
SNED1Q8TER0 SNORD56.6-201ENST00000384569 71 ntBASIC6.41□□□□□ -1.38
SNED1Q8TER0 RPL10P10-201ENST00000403509 664 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms