Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AP003396.4-201ENST00000527574 265 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 AC024405.1-201ENST00000532521 1042 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.73□□□□□ -1.65
CX3CL1P78423 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CL1P78423 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.73□□□□□ -1.65
CX3CL1P78423 AC016839.1-201ENST00000578162 867 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.73□□□□□ -1.65
CX3CL1P78423 AC008507.3-201ENST00000585753 472 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 AC006116.7-201ENST00000590141 756 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.73□□□□□ -1.65
CX3CL1P78423 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC4.73□□□□□ -1.65
CX3CL1P78423 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.73□□□□□ -1.65
CX3CL1P78423 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC4.73□□□□□ -1.65
CX3CL1P78423 AC110792.4-201ENST00000609843 298 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CL1P78423 AC016957.2-201ENST00000616998 848 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 AC022306.3-201ENST00000619930 550 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 AC068880.4-201ENST00000623082 495 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 AC073593.1-201ENST00000624500 411 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.73□□□□□ -1.65
CX3CL1P78423 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CL1P78423 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CL1P78423 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CL1P78423 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CL1P78423 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CL1P78423 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.73□□□□□ -1.65
CX3CL1P78423 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CL1P78423 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CX3CL1P78423 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CX3CL1P78423 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CL1P78423 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CL1P78423 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CL1P78423 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CL1P78423 MTND4P9-201ENST00000507819 1346 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.72□□□□□ -1.65
CX3CL1P78423 BCORP1-203ENST00000513194 5093 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CX3CL1P78423 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CX3CL1P78423 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CX3CL1P78423 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CX3CL1P78423 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CX3CL1P78423 RNU6-796P-201ENST00000391086 107 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 AC104297.1-201ENST00000393779 870 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 RNU2-17P-201ENST00000410290 190 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 RNU2-22P-201ENST00000411266 212 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 RPL35AP3-201ENST00000414680 288 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC4.72□□□□□ -1.65
CX3CL1P78423 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC4.72□□□□□ -1.65
CX3CL1P78423 MTND2P9-201ENST00000422293 931 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 REREP1Y-201ENST00000422655 198 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 RPS27AP6-201ENST00000427962 448 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.72□□□□□ -1.65
CX3CL1P78423 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CX3CL1P78423 REREP2Y-201ENST00000439103 200 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.72□□□□□ -1.65
CX3CL1P78423 AC005077.1-201ENST00000449226 375 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 CLIC4P1-201ENST00000453177 535 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CX3CL1P78423 RN7SL269P-201ENST00000467795 305 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CX3CL1P78423 PFN1P6-201ENST00000476786 399 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 AC020779.1-201ENST00000478757 796 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CX3CL1P78423 CAB39P1-201ENST00000502277 460 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 NAMPTP2-201ENST00000505629 1115 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC4.72□□□□□ -1.65
CX3CL1P78423 snoU109.5-201ENST00000516231 132 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 RNA5SP473-201ENST00000516402 125 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.72□□□□□ -1.65
CX3CL1P78423 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.72□□□□□ -1.65
CX3CL1P78423 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.72□□□□□ -1.65
CX3CL1P78423 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CX3CL1P78423 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.72□□□□□ -1.65
CX3CL1P78423 AC244502.2-201ENST00000543361 851 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.72□□□□□ -1.65
CX3CL1P78423 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.72□□□□□ -1.65
CX3CL1P78423 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.72□□□□□ -1.65
CX3CL1P78423 AC007956.1-201ENST00000555623 542 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.72□□□□□ -1.65
CX3CL1P78423 LINC00556-201ENST00000569603 412 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.72□□□□□ -1.65
CX3CL1P78423 AC005244.1-201ENST00000582566 339 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC4.72□□□□□ -1.65
CX3CL1P78423 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.72□□□□□ -1.65
CX3CL1P78423 AC090236.2-201ENST00000587933 1101 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CX3CL1P78423 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.72□□□□□ -1.65
CX3CL1P78423 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4.72□□□□□ -1.65
CX3CL1P78423 AC133794.1-201ENST00000602731 914 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 AL451049.1-201ENST00000608672 497 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 AL021918.2-201ENST00000613415 194 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.72□□□□□ -1.65
CX3CL1P78423 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 AC018926.1-201ENST00000616335 435 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.72□□□□□ -1.65
CX3CL1P78423 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.72□□□□□ -1.65
CX3CL1P78423 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.72□□□□□ -1.65
CX3CL1P78423 AL136228.1-201ENST00000622221 319 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 SNX18P12-201ENST00000624821 759 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms