Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LIMK2P53671 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LIMK2P53671 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.53□□□□□ -1.52
LIMK2P53671 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
LIMK2P53671 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LIMK2P53671 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIMK2P53671 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIMK2P53671 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
LIMK2P53671 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LIMK2P53671 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
LIMK2P53671 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LIMK2P53671 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LIMK2P53671 RNA5SP131-201ENST00000365452 119 ntBASIC5.52□□□□□ -1.53
LIMK2P53671 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.52□□□□□ -1.53
LIMK2P53671 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.52□□□□□ -1.53
LIMK2P53671 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.52□□□□□ -1.53
LIMK2P53671 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIMK2P53671 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.52□□□□□ -1.53
LIMK2P53671 LDHBP2-201ENST00000456969 1005 ntBASIC5.52□□□□□ -1.53
LIMK2P53671 AP001960.1-201ENST00000506494 658 ntBASIC5.52□□□□□ -1.53
LIMK2P53671 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.52□□□□□ -1.53
LIMK2P53671 RNU4-18P-201ENST00000516751 149 ntBASIC5.52□□□□□ -1.53
LIMK2P53671 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.52□□□□□ -1.53
LIMK2P53671 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.52□□□□□ -1.53
LIMK2P53671 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.52□□□□□ -1.53
LIMK2P53671 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LIMK2P53671 AC027026.1-201ENST00000532323 742 ntBASIC5.52□□□□□ -1.53
LIMK2P53671 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.52□□□□□ -1.53
LIMK2P53671 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LIMK2P53671 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LIMK2P53671 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.52□□□□□ -1.53
LIMK2P53671 AC007204.2-201ENST00000615022 616 ntBASIC5.52□□□□□ -1.53
LIMK2P53671 uc_338.7-201ENST00000621834 124 ntBASIC5.52□□□□□ -1.53
LIMK2P53671 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.52□□□□□ -1.53
LIMK2P53671 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
LIMK2P53671 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LIMK2P53671 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIMK2P53671 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIMK2P53671 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LIMK2P53671 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
LIMK2P53671 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
LIMK2P53671 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LIMK2P53671 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.51□□□□□ -1.53
LIMK2P53671 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LIMK2P53671 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LIMK2P53671 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
LIMK2P53671 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
LIMK2P53671 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LIMK2P53671 OR9K1P-201ENST00000326513 941 ntBASIC5.51□□□□□ -1.53
LIMK2P53671 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LIMK2P53671 GAPDHP42-201ENST00000406848 981 ntBASIC5.51□□□□□ -1.53
LIMK2P53671 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.51□□□□□ -1.53
LIMK2P53671 Z93019.1-201ENST00000416450 973 ntBASIC5.51□□□□□ -1.53
LIMK2P53671 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.51□□□□□ -1.53
LIMK2P53671 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.51□□□□□ -1.53
LIMK2P53671 AL390119.1-201ENST00000440329 312 ntBASIC5.51□□□□□ -1.53
LIMK2P53671 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.51□□□□□ -1.53
LIMK2P53671 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.51□□□□□ -1.53
LIMK2P53671 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.51□□□□□ -1.53
LIMK2P53671 AC007386.1-201ENST00000455212 582 ntBASIC5.51□□□□□ -1.53
LIMK2P53671 AC090602.1-201ENST00000469695 252 ntBASIC5.51□□□□□ -1.53
LIMK2P53671 AC021193.1-201ENST00000511607 420 ntBASIC5.51□□□□□ -1.53
LIMK2P53671 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.51□□□□□ -1.53
LIMK2P53671 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.51□□□□□ -1.53
LIMK2P53671 AC084033.1-201ENST00000550830 633 ntBASIC5.51□□□□□ -1.53
LIMK2P53671 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.51□□□□□ -1.53
LIMK2P53671 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LIMK2P53671 RBM22P12-201ENST00000567098 1255 ntBASIC5.51□□□□□ -1.53
LIMK2P53671 AC015720.2-201ENST00000567709 334 ntBASIC5.51□□□□□ -1.53
LIMK2P53671 NF1P10-201ENST00000613227 742 ntBASIC5.51□□□□□ -1.53
LIMK2P53671 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LIMK2P53671 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LIMK2P53671 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.51□□□□□ -1.53
LIMK2P53671 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
LIMK2P53671 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LIMK2P53671 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.51□□□□□ -1.53
LIMK2P53671 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LIMK2P53671 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
LIMK2P53671 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LIMK2P53671 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LIMK2P53671 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LIMK2P53671 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
LIMK2P53671 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LIMK2P53671 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LIMK2P53671 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LIMK2P53671 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LIMK2P53671 RN7SKP59-201ENST00000410520 314 ntBASIC5.5□□□□□ -1.53
LIMK2P53671 HYALP1-201ENST00000417674 1279 ntBASIC5.5□□□□□ -1.53
LIMK2P53671 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.5□□□□□ -1.53
LIMK2P53671 CFL1P1-202ENST00000432948 411 ntBASIC5.5□□□□□ -1.53
LIMK2P53671 CYCSP51-201ENST00000443545 318 ntBASIC5.5□□□□□ -1.53
LIMK2P53671 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LIMK2P53671 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.5□□□□□ -1.53
LIMK2P53671 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LIMK2P53671 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.5□□□□□ -1.53
LIMK2P53671 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.5□□□□□ -1.53
LIMK2P53671 GOLGA5P1-201ENST00000507317 980 ntBASIC5.5□□□□□ -1.53
LIMK2P53671 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
LIMK2P53671 RNA5SP34-201ENST00000516887 130 ntBASIC5.5□□□□□ -1.53
LIMK2P53671 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms