Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SNORD56.4-201ENST00000363883 71 ntBASIC6.19□□□□□ -1.42
NEK3P51956 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.19□□□□□ -1.42
NEK3P51956 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.19□□□□□ -1.42
NEK3P51956 AC069282.1-201ENST00000411911 526 ntBASIC6.19□□□□□ -1.42
NEK3P51956 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.19□□□□□ -1.42
NEK3P51956 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.19□□□□□ -1.42
NEK3P51956 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NEK3P51956 AC022431.1-201ENST00000450941 438 ntBASIC6.19□□□□□ -1.42
NEK3P51956 RNU7-27P-201ENST00000459281 62 ntBASIC6.19□□□□□ -1.42
NEK3P51956 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.19□□□□□ -1.42
NEK3P51956 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.19□□□□□ -1.42
NEK3P51956 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.19□□□□□ -1.42
NEK3P51956 RN7SKP238-201ENST00000516483 249 ntBASIC6.19□□□□□ -1.42
NEK3P51956 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.19□□□□□ -1.42
NEK3P51956 AC018442.3-201ENST00000523025 183 ntBASIC6.19□□□□□ -1.42
NEK3P51956 AP003396.4-201ENST00000527574 265 ntBASIC6.19□□□□□ -1.42
NEK3P51956 AC079905.1-201ENST00000549280 475 ntBASIC6.19□□□□□ -1.42
NEK3P51956 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.19□□□□□ -1.42
NEK3P51956 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.19□□□□□ -1.42
NEK3P51956 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.19□□□□□ -1.42
NEK3P51956 AGGF1P7-201ENST00000562369 913 ntBASIC6.19□□□□□ -1.42
NEK3P51956 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.19□□□□□ -1.42
NEK3P51956 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.19□□□□□ -1.42
NEK3P51956 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.19□□□□□ -1.42
NEK3P51956 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.19□□□□□ -1.42
NEK3P51956 AC008555.7-201ENST00000605008 583 ntBASIC6.19□□□□□ -1.42
NEK3P51956 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.19□□□□□ -1.42
NEK3P51956 AC097504.2-201ENST00000608088 454 ntBASIC6.19□□□□□ -1.42
NEK3P51956 AP000864.1-201ENST00000609424 650 ntBASIC6.19□□□□□ -1.42
NEK3P51956 AL365181.4-201ENST00000609800 547 ntBASIC6.19□□□□□ -1.42
NEK3P51956 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
NEK3P51956 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.19□□□□□ -1.42
NEK3P51956 AC099654.6-201ENST00000636487 512 ntBASIC6.19□□□□□ -1.42
NEK3P51956 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NEK3P51956 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.19□□□□□ -1.42
NEK3P51956 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.19□□□□□ -1.42
NEK3P51956 AC008627.1-201ENST00000517511 1704 ntBASIC6.19□□□□□ -1.42
NEK3P51956 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.18□□□□□ -1.42
NEK3P51956 AC022325.1-201ENST00000502748 2199 ntBASIC6.18□□□□□ -1.42
NEK3P51956 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.18□□□□□ -1.42
NEK3P51956 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NEK3P51956 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NEK3P51956 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NEK3P51956 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NEK3P51956 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.18□□□□□ -1.42
NEK3P51956 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
NEK3P51956 RN7SKP15-201ENST00000364742 309 ntBASIC6.18□□□□□ -1.42
NEK3P51956 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.18□□□□□ -1.42
NEK3P51956 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NEK3P51956 HMGB3P19-201ENST00000403971 560 ntBASIC6.18□□□□□ -1.42
NEK3P51956 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.18□□□□□ -1.42
NEK3P51956 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.18□□□□□ -1.42
NEK3P51956 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC6.18□□□□□ -1.42
NEK3P51956 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.18□□□□□ -1.42
NEK3P51956 RPS4XP16-201ENST00000427198 791 ntBASIC6.18□□□□□ -1.42
NEK3P51956 AC005189.1-201ENST00000431286 310 ntBASIC6.18□□□□□ -1.42
NEK3P51956 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.18□□□□□ -1.42
NEK3P51956 MTND2P2-201ENST00000434633 945 ntBASIC6.18□□□□□ -1.42
NEK3P51956 TRAPPC13P1-201ENST00000435991 1062 ntBASIC6.18□□□□□ -1.42
NEK3P51956 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC6.18□□□□□ -1.42
NEK3P51956 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.18□□□□□ -1.42
NEK3P51956 RPS17P11-201ENST00000474297 293 ntBASIC6.18□□□□□ -1.42
NEK3P51956 SNRPCP3-201ENST00000474888 476 ntBASIC6.18□□□□□ -1.42
NEK3P51956 CBX1P5-201ENST00000475330 559 ntBASIC6.18□□□□□ -1.42
NEK3P51956 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.18□□□□□ -1.42
NEK3P51956 AC025458.1-201ENST00000506046 166 ntBASIC6.18□□□□□ -1.42
NEK3P51956 AC119751.4-201ENST00000507498 357 ntBASIC6.18□□□□□ -1.42
NEK3P51956 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.18□□□□□ -1.42
NEK3P51956 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.18□□□□□ -1.42
NEK3P51956 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.18□□□□□ -1.42
NEK3P51956 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.18□□□□□ -1.42
NEK3P51956 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC6.18□□□□□ -1.42
NEK3P51956 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.18□□□□□ -1.42
NEK3P51956 HMGB1P42-201ENST00000532126 553 ntBASIC6.18□□□□□ -1.42
NEK3P51956 AP000916.1-201ENST00000533869 835 ntBASIC6.18□□□□□ -1.42
NEK3P51956 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.18□□□□□ -1.42
NEK3P51956 OR11H3P-201ENST00000554547 982 ntBASIC6.18□□□□□ -1.42
NEK3P51956 AC007956.1-201ENST00000555623 542 ntBASIC6.18□□□□□ -1.42
NEK3P51956 RPA2P1-201ENST00000556557 721 ntBASIC6.18□□□□□ -1.42
NEK3P51956 AL049779.3-201ENST00000557141 606 ntBASIC6.18□□□□□ -1.42
NEK3P51956 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.18□□□□□ -1.42
NEK3P51956 RBM22P12-201ENST00000567098 1255 ntBASIC6.18□□□□□ -1.42
NEK3P51956 AP001357.1-201ENST00000586304 1053 ntBASIC6.18□□□□□ -1.42
NEK3P51956 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.18□□□□□ -1.42
NEK3P51956 AC245014.3-201ENST00000618589 347 ntBASIC6.18□□□□□ -1.42
NEK3P51956 AC129778.1-202ENST00000623812 261 ntBASIC6.18□□□□□ -1.42
NEK3P51956 AP001962.1-201ENST00000624114 559 ntBASIC6.18□□□□□ -1.42
NEK3P51956 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.18□□□□□ -1.42
NEK3P51956 AC073488.3-201ENST00000631611 778 ntBASIC6.18□□□□□ -1.42
NEK3P51956 AL591379.1-207ENST00000635982 261 ntBASIC6.18□□□□□ -1.42
NEK3P51956 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.18□□□□□ -1.42
NEK3P51956 OR7A1P-202ENST00000641542 1158 ntBASIC6.18□□□□□ -1.42
NEK3P51956 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NEK3P51956 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NEK3P51956 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.18□□□□□ -1.42
NEK3P51956 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.18□□□□□ -1.42
NEK3P51956 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
NEK3P51956 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.18□□□□□ -1.42
NEK3P51956 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.18□□□□□ -1.42
NEK3P51956 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms