Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CNGA1P29973 AC010376.1-201ENST00000522101 334 ntBASIC6.92□□□□□ -1.3
CNGA1P29973 IGKV2-18-201ENST00000522607 343 ntBASIC6.92□□□□□ -1.3
CNGA1P29973 AP000648.1-201ENST00000529682 397 ntBASIC6.92□□□□□ -1.3
CNGA1P29973 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CNGA1P29973 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CNGA1P29973 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.92□□□□□ -1.3
CNGA1P29973 AL049838.1-201ENST00000563647 981 ntBASIC6.92□□□□□ -1.3
CNGA1P29973 AC020916.2-201ENST00000591242 360 ntBASIC6.92□□□□□ -1.3
CNGA1P29973 AP002884.5-201ENST00000595053 1132 ntBASIC6.92□□□□□ -1.3
CNGA1P29973 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.92□□□□□ -1.3
CNGA1P29973 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CNGA1P29973 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CNGA1P29973 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.92□□□□□ -1.3
CNGA1P29973 FAM27E4-201ENST00000605259 342 ntBASIC6.92□□□□□ -1.3
CNGA1P29973 AL031601.1-201ENST00000605702 394 ntBASIC6.92□□□□□ -1.3
CNGA1P29973 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.92□□□□□ -1.3
CNGA1P29973 AL359513.1-201ENST00000614364 557 ntBASIC6.92□□□□□ -1.3
CNGA1P29973 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.92□□□□□ -1.3
CNGA1P29973 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.92□□□□□ -1.3
CNGA1P29973 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.92□□□□□ -1.3
CNGA1P29973 AC116667.2-201ENST00000641075 823 ntBASIC6.92□□□□□ -1.3
CNGA1P29973 MIR193BHG-214ENST00000641765 509 ntBASIC6.92□□□□□ -1.3
CNGA1P29973 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CNGA1P29973 AC011416.1-201ENST00000514947 1732 ntBASIC6.92□□□□□ -1.3
CNGA1P29973 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CNGA1P29973 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CNGA1P29973 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CNGA1P29973 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CNGA1P29973 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CNGA1P29973 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
CNGA1P29973 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.92□□□□□ -1.3
CNGA1P29973 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CNGA1P29973 CDC27P2-201ENST00000425026 1922 ntBASIC6.91□□□□□ -1.3
CNGA1P29973 AC003973.3-201ENST00000624863 2822 ntBASIC6.91□□□□□ -1.3
CNGA1P29973 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNGA1P29973 BIN2P1-201ENST00000504996 1530 ntBASIC6.91□□□□□ -1.3
CNGA1P29973 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNGA1P29973 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNGA1P29973 AC011815.2-201ENST00000618230 2021 ntBASIC6.91□□□□□ -1.3
CNGA1P29973 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNGA1P29973 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
CNGA1P29973 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.91□□□□□ -1.3
CNGA1P29973 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNGA1P29973 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.91□□□□□ -1.3
CNGA1P29973 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNGA1P29973 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNGA1P29973 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
CNGA1P29973 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNGA1P29973 AC123769.1-201ENST00000530992 3192 ntBASIC6.91□□□□□ -1.3
CNGA1P29973 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.91□□□□□ -1.3
CNGA1P29973 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.91□□□□□ -1.3
CNGA1P29973 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.91□□□□□ -1.3
CNGA1P29973 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNGA1P29973 RNU1-150P-201ENST00000362491 162 ntBASIC6.91□□□□□ -1.3
CNGA1P29973 SNORD56.4-201ENST00000363883 71 ntBASIC6.91□□□□□ -1.3
CNGA1P29973 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNGA1P29973 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNGA1P29973 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.91□□□□□ -1.3
CNGA1P29973 AC096533.1-201ENST00000411645 353 ntBASIC6.91□□□□□ -1.3
CNGA1P29973 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.91□□□□□ -1.3
CNGA1P29973 UBE2V1P9-201ENST00000414760 368 ntBASIC6.91□□□□□ -1.3
CNGA1P29973 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.91□□□□□ -1.3
CNGA1P29973 UBE2V1P14-201ENST00000415815 558 ntBASIC6.91□□□□□ -1.3
CNGA1P29973 AC008173.1-201ENST00000418901 264 ntBASIC6.91□□□□□ -1.3
CNGA1P29973 PTP4A1P7-201ENST00000423476 514 ntBASIC6.91□□□□□ -1.3
CNGA1P29973 RPS7P2-201ENST00000435134 607 ntBASIC6.91□□□□□ -1.3
CNGA1P29973 RRM2P4-201ENST00000441721 562 ntBASIC6.91□□□□□ -1.3
CNGA1P29973 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC6.91□□□□□ -1.3
CNGA1P29973 GAPDHP23-201ENST00000444823 993 ntBASIC6.91□□□□□ -1.3
CNGA1P29973 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.91□□□□□ -1.3
CNGA1P29973 AL445466.1-201ENST00000448432 357 ntBASIC6.91□□□□□ -1.3
CNGA1P29973 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.91□□□□□ -1.3
CNGA1P29973 CYCSP42-201ENST00000450823 238 ntBASIC6.91□□□□□ -1.3
CNGA1P29973 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNGA1P29973 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC6.91□□□□□ -1.3
CNGA1P29973 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.91□□□□□ -1.3
CNGA1P29973 RPL17P2-201ENST00000491913 451 ntBASIC6.91□□□□□ -1.3
CNGA1P29973 TPT1P3-201ENST00000492841 512 ntBASIC6.91□□□□□ -1.3
CNGA1P29973 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.91□□□□□ -1.3
CNGA1P29973 AC010374.1-201ENST00000503762 1237 ntBASIC6.91□□□□□ -1.3
CNGA1P29973 AC109481.1-201ENST00000509173 282 ntBASIC6.91□□□□□ -1.3
CNGA1P29973 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.91□□□□□ -1.3
CNGA1P29973 AC111000.6-201ENST00000514471 709 ntBASIC6.91□□□□□ -1.3
CNGA1P29973 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.91□□□□□ -1.3
CNGA1P29973 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CNGA1P29973 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.91□□□□□ -1.3
CNGA1P29973 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.91□□□□□ -1.3
CNGA1P29973 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.91□□□□□ -1.3
CNGA1P29973 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.91□□□□□ -1.3
CNGA1P29973 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.91□□□□□ -1.3
CNGA1P29973 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC6.91□□□□□ -1.3
CNGA1P29973 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNGA1P29973 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.91□□□□□ -1.3
CNGA1P29973 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC6.91□□□□□ -1.3
CNGA1P29973 AC006927.2-201ENST00000639256 389 ntBASIC6.91□□□□□ -1.3
CNGA1P29973 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNGA1P29973 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNGA1P29973 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNGA1P29973 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms