Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 ELOCP4-201ENST00000420090 333 ntBASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 RPL34P3-201ENST00000421454 338 ntBASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 MTCO1P54-201ENST00000430139 712 ntBASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 LIN28AP2-201ENST00000445283 458 ntBASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 AL591379.2-201ENST00000450223 397 ntBASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 AC079944.1-201ENST00000485426 495 ntBASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 RN7SL153P-201ENST00000486501 292 ntBASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 HMGB3P15-201ENST00000507326 574 ntBASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 AC105031.1-201ENST00000518550 476 ntBASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 SCOCP1-201ENST00000554676 349 ntBASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 COX6CP11-201ENST00000555293 229 ntBASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 MIR4680-201ENST00000580906 66 ntBASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 AP005137.2-201ENST00000609238 400 ntBASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 MIR6731-201ENST00000614863 72 ntBASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 AC231657.1-201ENST00000624313 397 ntBASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 AC233280.20-201ENST00000637412 416 ntBASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 TRIM60-204ENST00000512596 1888 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 ARHGAP42P5-201ENST00000548856 2936 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 AC024560.2-201ENST00000507981 1497 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 METTL21EP-201ENST00000298105 713 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 RN7SKP211-201ENST00000363328 315 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 SNORD46-201ENST00000364043 104 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 Y_RNA.489-201ENST00000384410 101 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 RNU6-33P-201ENST00000384793 107 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 SNORD65.1-201ENST00000390889 71 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 HMGB3P31-201ENST00000413333 595 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 MTND6P13-201ENST00000443510 523 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 SS18L2P1-201ENST00000445923 213 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 FTH1P7-201ENST00000450676 552 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 HIGD1AP8-201ENST00000453927 274 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 AC079193.1-201ENST00000460497 588 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 AC008620.1-201ENST00000468453 592 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 AC135999.1-201ENST00000478962 479 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 RN7SL332P-201ENST00000482163 254 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 AC097263.1-201ENST00000496795 606 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 ENPP7P3-201ENST00000509123 241 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 AC108064.1-201ENST00000513791 460 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 RNU6-559P-201ENST00000516151 98 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 AC009812.2-201ENST00000517657 457 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 OR6M3P-201ENST00000531567 700 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 OR5B19P-201ENST00000531766 928 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 YWHABP2-201ENST00000540201 713 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 RBM4-213ENST00000578778 582 ntTSL 4 BASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 MIR4786-201ENST00000583954 80 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 CYP2C61P-201ENST00000604072 290 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 AP001330.4-201ENST00000604350 154 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 CUX2P1-201ENST00000606426 298 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 AC245060.6-201ENST00000624350 8420 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 MELK-201ENST00000298048 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 AC016831.3-201ENST00000446451 1723 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 HSPA8P11-201ENST00000508840 1898 ntBASIC9.79□□□□□ -0.84
TRIM35Q9UPQ4 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms