Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRFN1Q9P244 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRFN1Q9P244 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRFN1Q9P244 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRFN1Q9P244 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRFN1Q9P244 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRFN1Q9P244 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.67□□□□□ -1.5
LRFN1Q9P244 DOCK11P1-201ENST00000553480 5932 ntBASIC5.67□□□□□ -1.5
LRFN1Q9P244 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LRFN1Q9P244 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 VN2R3P-201ENST00000422626 1412 ntBASIC5.67□□□□□ -1.5
LRFN1Q9P244 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LRFN1Q9P244 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LRFN1Q9P244 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
LRFN1Q9P244 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LRFN1Q9P244 AC023490.2-201ENST00000359859 470 ntBASIC5.67□□□□□ -1.5
LRFN1Q9P244 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 RMRPP5-201ENST00000411156 267 ntBASIC5.67□□□□□ -1.5
LRFN1Q9P244 VN1R51P-201ENST00000411675 945 ntBASIC5.67□□□□□ -1.5
LRFN1Q9P244 VTA1P1-201ENST00000414044 866 ntBASIC5.67□□□□□ -1.5
LRFN1Q9P244 TCEA1P4-201ENST00000415066 844 ntBASIC5.67□□□□□ -1.5
LRFN1Q9P244 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 RPL35AP31-201ENST00000418340 337 ntBASIC5.67□□□□□ -1.5
LRFN1Q9P244 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 AC066692.1-201ENST00000421721 457 ntBASIC5.67□□□□□ -1.5
LRFN1Q9P244 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 ELOCP6-201ENST00000429066 328 ntBASIC5.67□□□□□ -1.5
LRFN1Q9P244 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 AL391987.1-201ENST00000441025 200 ntBASIC5.67□□□□□ -1.5
LRFN1Q9P244 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LRFN1Q9P244 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 ELOCP12-201ENST00000458706 328 ntBASIC5.67□□□□□ -1.5
LRFN1Q9P244 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 AC018635.1-201ENST00000468292 1030 ntBASIC5.67□□□□□ -1.5
LRFN1Q9P244 RN7SL423P-201ENST00000486202 304 ntBASIC5.67□□□□□ -1.5
LRFN1Q9P244 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 AC069306.1-201ENST00000507006 843 ntBASIC5.67□□□□□ -1.5
LRFN1Q9P244 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 SCARNA21.2-201ENST00000516600 166 ntBASIC5.67□□□□□ -1.5
LRFN1Q9P244 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 AC007956.1-201ENST00000555623 542 ntBASIC5.67□□□□□ -1.5
LRFN1Q9P244 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LRFN1Q9P244 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 AC068768.2-201ENST00000602352 343 ntBASIC5.67□□□□□ -1.5
LRFN1Q9P244 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 AC099654.8-201ENST00000637757 681 ntBASIC5.67□□□□□ -1.5
LRFN1Q9P244 MIR4302-201ENST00000638058 60 ntBASIC5.67□□□□□ -1.5
LRFN1Q9P244 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.67□□□□□ -1.5
LRFN1Q9P244 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LRFN1Q9P244 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LRFN1Q9P244 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LRFN1Q9P244 Z95114.1-201ENST00000624264 14574 ntBASIC5.67□□□□□ -1.5
LRFN1Q9P244 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRFN1Q9P244 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRFN1Q9P244 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LRFN1Q9P244 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LRFN1Q9P244 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 AC008627.1-201ENST00000517511 1704 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LRFN1Q9P244 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LRFN1Q9P244 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 AL662795.2-201ENST00000624252 3706 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRFN1Q9P244 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 RNU5B-4P-201ENST00000363508 111 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 SNORA43.1-201ENST00000364863 140 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 SNORA70.9-201ENST00000384370 135 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LRFN1Q9P244 HMGN1P20-201ENST00000411849 300 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms