Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SSX3Q99909 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC4.93□□□□□ -1.62
SSX3Q99909 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSX3Q99909 RBMY1HP-201ENST00000382759 1389 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSX3Q99909 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSX3Q99909 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.93□□□□□ -1.62
SSX3Q99909 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC4.93□□□□□ -1.62
SSX3Q99909 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.93□□□□□ -1.62
SSX3Q99909 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SSX3Q99909 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC4.93□□□□□ -1.62
SSX3Q99909 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.93□□□□□ -1.62
SSX3Q99909 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSX3Q99909 ST13P16-201ENST00000401760 781 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SSX3Q99909 RN7SKP279-201ENST00000411383 298 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 AC245096.1-201ENST00000413104 546 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 AL512504.1-201ENST00000415494 778 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 AL356806.1-201ENST00000422524 916 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.93□□□□□ -1.62
SSX3Q99909 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC4.93□□□□□ -1.62
SSX3Q99909 FHP1-201ENST00000442741 703 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 TRIM60P16-201ENST00000444048 694 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC4.93□□□□□ -1.62
SSX3Q99909 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SSX3Q99909 ZNF619P1-201ENST00000446539 752 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.93□□□□□ -1.62
SSX3Q99909 AL359091.1-201ENST00000449048 1734 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SSX3Q99909 RPS27AP3-201ENST00000453803 454 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.93□□□□□ -1.62
SSX3Q99909 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.93□□□□□ -1.62
SSX3Q99909 AC073594.1-201ENST00000462065 364 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.93□□□□□ -1.62
SSX3Q99909 AC096741.1-201ENST00000472250 846 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 AC069304.1-201ENST00000491593 704 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.93□□□□□ -1.62
SSX3Q99909 AC008945.1-201ENST00000505144 499 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.93□□□□□ -1.62
SSX3Q99909 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC4.93□□□□□ -1.62
SSX3Q99909 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.93□□□□□ -1.62
SSX3Q99909 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SSX3Q99909 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SSX3Q99909 RNA5SP434-201ENST00000516647 121 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 AC067904.2-201ENST00000517322 1283 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 AC008627.1-201ENST00000517511 1704 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.93□□□□□ -1.62
SSX3Q99909 AP004609.2-201ENST00000532177 190 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC4.93□□□□□ -1.62
SSX3Q99909 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSX3Q99909 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.93□□□□□ -1.62
SSX3Q99909 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.93□□□□□ -1.62
SSX3Q99909 AC007956.1-201ENST00000555623 542 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 RPA2P1-201ENST00000556557 721 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.93□□□□□ -1.62
SSX3Q99909 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SSX3Q99909 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.93□□□□□ -1.62
SSX3Q99909 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.93□□□□□ -1.62
SSX3Q99909 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.93□□□□□ -1.62
SSX3Q99909 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SSX3Q99909 AC068768.2-201ENST00000602352 343 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 AC073111.2-201ENST00000605657 1075 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 AL645933.2-201ENST00000606743 1207 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.93□□□□□ -1.62
SSX3Q99909 AL021368.3-201ENST00000607119 578 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 AL096712.1-201ENST00000614561 159 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.93□□□□□ -1.62
SSX3Q99909 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SSX3Q99909 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSX3Q99909 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSX3Q99909 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.93□□□□□ -1.62
SSX3Q99909 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.93□□□□□ -1.62
SSX3Q99909 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.93□□□□□ -1.62
SSX3Q99909 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SSX3Q99909 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
SSX3Q99909 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SSX3Q99909 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.92□□□□□ -1.62
SSX3Q99909 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
SSX3Q99909 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSX3Q99909 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC4.92□□□□□ -1.62
SSX3Q99909 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.92□□□□□ -1.62
SSX3Q99909 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.92□□□□□ -1.62
SSX3Q99909 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSX3Q99909 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSX3Q99909 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SSX3Q99909 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSX3Q99909 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC4.92□□□□□ -1.62
SSX3Q99909 AC023490.2-201ENST00000359859 470 ntBASIC4.92□□□□□ -1.62
SSX3Q99909 RNA5SP375-201ENST00000362975 119 ntBASIC4.92□□□□□ -1.62
SSX3Q99909 AL096829.1-201ENST00000413677 457 ntBASIC4.92□□□□□ -1.62
SSX3Q99909 EEF1B2P8-201ENST00000414101 671 ntBASIC4.92□□□□□ -1.62
SSX3Q99909 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSX3Q99909 AL590609.2-201ENST00000421430 368 ntBASIC4.92□□□□□ -1.62
SSX3Q99909 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSX3Q99909 AC015983.1-201ENST00000441577 373 ntBASIC4.92□□□□□ -1.62
SSX3Q99909 AC092106.1-201ENST00000444291 373 ntBASIC4.92□□□□□ -1.62
SSX3Q99909 FTLP8-201ENST00000446770 267 ntBASIC4.92□□□□□ -1.62
SSX3Q99909 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSX3Q99909 ACA64.1-201ENST00000459171 127 ntBASIC4.92□□□□□ -1.62
SSX3Q99909 AC021205.1-201ENST00000468797 348 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms