Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 FTH1P11-201ENST00000517577 551 ntBASIC5.65□□□□□ -1.5
RPRD1AQ96P16 IGKV2-18-201ENST00000522607 343 ntBASIC5.65□□□□□ -1.5
RPRD1AQ96P16 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.65□□□□□ -1.5
RPRD1AQ96P16 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RPRD1AQ96P16 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.65□□□□□ -1.5
RPRD1AQ96P16 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.65□□□□□ -1.5
RPRD1AQ96P16 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.65□□□□□ -1.5
RPRD1AQ96P16 AP000864.1-201ENST00000609424 650 ntBASIC5.65□□□□□ -1.5
RPRD1AQ96P16 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.65□□□□□ -1.5
RPRD1AQ96P16 AC015712.7-201ENST00000615211 635 ntBASIC5.65□□□□□ -1.5
RPRD1AQ96P16 AL589935.2-201ENST00000616471 1231 ntBASIC5.65□□□□□ -1.5
RPRD1AQ96P16 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.65□□□□□ -1.5
RPRD1AQ96P16 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.65□□□□□ -1.5
RPRD1AQ96P16 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.65□□□□□ -1.5
RPRD1AQ96P16 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RPRD1AQ96P16 AL355488.2-201ENST00000609909 2850 ntBASIC5.65□□□□□ -1.5
RPRD1AQ96P16 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
RPRD1AQ96P16 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RPRD1AQ96P16 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RPRD1AQ96P16 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.64□□□□□ -1.51
RPRD1AQ96P16 AC011503.2-201ENST00000594230 1500 ntBASIC5.64□□□□□ -1.51
RPRD1AQ96P16 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 CDC27P2-201ENST00000425026 1922 ntBASIC5.64□□□□□ -1.51
RPRD1AQ96P16 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 GVINP1-202ENST00000531871 7271 ntBASIC5.64□□□□□ -1.51
RPRD1AQ96P16 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 RN7SKP162-201ENST00000363605 345 ntBASIC5.64□□□□□ -1.51
RPRD1AQ96P16 SNORA16A-201ENST00000384342 137 ntBASIC5.64□□□□□ -1.51
RPRD1AQ96P16 RNU1-77P-201ENST00000390868 162 ntBASIC5.64□□□□□ -1.51
RPRD1AQ96P16 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.64□□□□□ -1.51
RPRD1AQ96P16 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 AL121878.1-201ENST00000418638 859 ntBASIC5.64□□□□□ -1.51
RPRD1AQ96P16 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 CYCSP6-201ENST00000434498 302 ntBASIC5.64□□□□□ -1.51
RPRD1AQ96P16 CYCSP12-201ENST00000437729 300 ntBASIC5.64□□□□□ -1.51
RPRD1AQ96P16 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 RPL7P45-201ENST00000455851 743 ntBASIC5.64□□□□□ -1.51
RPRD1AQ96P16 PSAT1P4-201ENST00000466500 526 ntBASIC5.64□□□□□ -1.51
RPRD1AQ96P16 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 AL359513.1-201ENST00000614364 557 ntBASIC5.64□□□□□ -1.51
RPRD1AQ96P16 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 SAMMSON-209ENST00000641222 1100 ntBASIC5.64□□□□□ -1.51
RPRD1AQ96P16 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.64□□□□□ -1.51
RPRD1AQ96P16 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 AC114774.1-201ENST00000507410 1770 ntBASIC5.63□□□□□ -1.51
RPRD1AQ96P16 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 AC092681.1-201ENST00000297369 291 ntBASIC5.63□□□□□ -1.51
RPRD1AQ96P16 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 SNORD56.6-201ENST00000384569 71 ntBASIC5.63□□□□□ -1.51
RPRD1AQ96P16 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 CFL1P1-202ENST00000432948 411 ntBASIC5.63□□□□□ -1.51
RPRD1AQ96P16 GSTM5P1-201ENST00000434751 660 ntBASIC5.63□□□□□ -1.51
RPRD1AQ96P16 RPS23P9-201ENST00000448848 438 ntBASIC5.63□□□□□ -1.51
RPRD1AQ96P16 MORF4L2P1-201ENST00000503761 858 ntBASIC5.63□□□□□ -1.51
RPRD1AQ96P16 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 OR8Q1P-201ENST00000526467 655 ntBASIC5.63□□□□□ -1.51
RPRD1AQ96P16 BLZF2P-201ENST00000553776 1130 ntBASIC5.63□□□□□ -1.51
RPRD1AQ96P16 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 MIR6826-201ENST00000617808 98 ntBASIC5.63□□□□□ -1.51
RPRD1AQ96P16 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RPRD1AQ96P16 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms