Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 HBBP1-201ENST00000433329 439 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 GTF2IP13-201ENST00000438487 386 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 SEPT14P3-201ENST00000439401 183 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 CYP2C56P-201ENST00000440076 291 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 RPS26P30-201ENST00000443431 335 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 AL732372.2-207ENST00000445840 183 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 HMGN1P36-201ENST00000446623 298 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 SEPT14P2-201ENST00000453405 183 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 SNORD19B-201ENST00000459623 84 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 AC135721.2-201ENST00000464237 300 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 RN7SL635P-201ENST00000492123 296 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 GAPDHP61-201ENST00000507324 1005 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 EIF3KP1-201ENST00000513279 656 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 SEPT14P4-201ENST00000513445 186 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 SNORA81.2-201ENST00000516868 170 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 RAD21-204ENST00000518055 896 ntTSL 2 BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 FO082796.1-201ENST00000523795 183 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 HIGD1AP9-201ENST00000550710 279 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 RPL21P5-201ENST00000554662 472 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 AC040162.2-201ENST00000573092 157 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 AC129492.5-201ENST00000603489 315 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 AC112187.2-201ENST00000604345 283 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 AL451085.1-201ENST00000604546 690 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 AL096855.2-201ENST00000605785 369 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 MIR6774-201ENST00000614651 70 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 CNTNAP3P1-201ENST00000616657 906 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 AL451054.1-201ENST00000621770 772 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 MIR369-201ENST00000362155 70 ntBASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 MIR555-201ENST00000384987 96 ntBASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 MIR431-201ENST00000385266 114 ntBASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 U8.14-201ENST00000390843 143 ntBASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 RNU6-1300P-201ENST00000391046 108 ntBASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 RPL5P18-201ENST00000406671 891 ntBASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 BCRP8-201ENST00000412037 255 ntBASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 AC004986.1-201ENST00000414855 607 ntBASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 AL445669.1-201ENST00000426743 755 ntBASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 ISCA1P6-201ENST00000427740 390 ntBASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 SALL1P1-201ENST00000438101 3837 ntBASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 AC132479.1-201ENST00000449160 144 ntBASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 AC234771.3-201ENST00000454984 622 ntBASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 AC073594.1-201ENST00000462065 364 ntBASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 KCTD9P2-201ENST00000512203 1013 ntBASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 SCARNA20.1-201ENST00000516009 138 ntBASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 PHBP17-201ENST00000528576 541 ntBASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 AC018523.1-201ENST00000534211 512 ntBASIC8.03□□□□□ -1.12
SCUBE3Q8IX30 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms