Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC3.17□□□□□ -1.9
APOBP04114 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
APOBP04114 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
APOBP04114 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
APOBP04114 AC108751.5-201ENST00000492880 1336 ntBASIC3.17□□□□□ -1.9
APOBP04114 PSD4-205ENST00000441564 11234 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
APOBP04114 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC3.17□□□□□ -1.9
APOBP04114 AC105342.1-201ENST00000378334 6848 ntBASIC3.17□□□□□ -1.9
APOBP04114 SNORA2.3-201ENST00000383920 135 ntBASIC3.17□□□□□ -1.9
APOBP04114 SNORA70F-201ENST00000384142 135 ntBASIC3.17□□□□□ -1.9
APOBP04114 RN7SKP106-201ENST00000410832 272 ntBASIC3.17□□□□□ -1.9
APOBP04114 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC3.17□□□□□ -1.9
APOBP04114 AL358232.1-201ENST00000448030 501 ntBASIC3.17□□□□□ -1.9
APOBP04114 AC023424.1-201ENST00000496058 459 ntBASIC3.17□□□□□ -1.9
APOBP04114 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC3.17□□□□□ -1.9
APOBP04114 AC245389.1-201ENST00000605141 529 ntBASIC3.17□□□□□ -1.9
APOBP04114 AC021106.3-201ENST00000623925 531 ntBASIC3.17□□□□□ -1.9
APOBP04114 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
APOBP04114 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC3.17□□□□□ -1.9
APOBP04114 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
APOBP04114 AC068446.1-201ENST00000556425 1549 ntBASIC3.17□□□□□ -1.9
APOBP04114 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
APOBP04114 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC3.17□□□□□ -1.9
APOBP04114 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
APOBP04114 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
APOBP04114 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
APOBP04114 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
APOBP04114 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
APOBP04114 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC3.17□□□□□ -1.9
APOBP04114 OFD1P8Y-201ENST00000449148 1433 ntBASIC3.17□□□□□ -1.9
APOBP04114 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC3.17□□□□□ -1.9
APOBP04114 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC3.17□□□□□ -1.9
APOBP04114 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
APOBP04114 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
APOBP04114 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.17□□□□□ -1.9
APOBP04114 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC3.17□□□□□ -1.9
APOBP04114 AL161722.2-201ENST00000434731 981 ntBASIC3.17□□□□□ -1.9
APOBP04114 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.17□□□□□ -1.9
APOBP04114 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC3.17□□□□□ -1.9
APOBP04114 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
APOBP04114 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
APOBP04114 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC3.17□□□□□ -1.9
APOBP04114 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC3.17□□□□□ -1.9
APOBP04114 AL591034.3-201ENST00000605511 685 ntBASIC3.17□□□□□ -1.9
APOBP04114 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
APOBP04114 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
APOBP04114 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
APOBP04114 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC3.17□□□□□ -1.9
APOBP04114 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC3.17□□□□□ -1.9
APOBP04114 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
APOBP04114 MITF-203ENST00000328528 4680 ntTSL 5 BASIC3.17□□□□□ -1.9
APOBP04114 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
APOBP04114 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
APOBP04114 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
APOBP04114 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
APOBP04114 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
APOBP04114 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.17□□□□□ -1.9
APOBP04114 AK3P5-201ENST00000432033 519 ntBASIC3.17□□□□□ -1.9
APOBP04114 KRT8P51-201ENST00000438938 274 ntBASIC3.17□□□□□ -1.9
APOBP04114 REG1CP-206ENST00000447469 496 ntBASIC3.17□□□□□ -1.9
APOBP04114 NDUFA5P8-201ENST00000449019 346 ntBASIC3.17□□□□□ -1.9
APOBP04114 MIR3158-1-201ENST00000583596 81 ntBASIC3.17□□□□□ -1.9
APOBP04114 AC105254.2-201ENST00000603636 436 ntBASIC3.17□□□□□ -1.9
APOBP04114 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.17□□□□□ -1.9
APOBP04114 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
APOBP04114 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
APOBP04114 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
APOBP04114 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
APOBP04114 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC3.16□□□□□ -1.9
APOBP04114 AL450345.1-202ENST00000605741 3881 ntBASIC3.16□□□□□ -1.9
APOBP04114 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
APOBP04114 SNORD56.6-201ENST00000384569 71 ntBASIC3.16□□□□□ -1.9
APOBP04114 SNORA77-201ENST00000408716 125 ntBASIC3.16□□□□□ -1.9
APOBP04114 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
APOBP04114 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC3.16□□□□□ -1.9
APOBP04114 RPL23AP56-201ENST00000460778 453 ntBASIC3.16□□□□□ -1.9
APOBP04114 CR383656.1-201ENST00000484916 377 ntBASIC3.16□□□□□ -1.9
APOBP04114 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
APOBP04114 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC3.16□□□□□ -1.9
APOBP04114 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
APOBP04114 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
APOBP04114 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
APOBP04114 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
APOBP04114 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC3.16□□□□□ -1.9
APOBP04114 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
APOBP04114 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
APOBP04114 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
APOBP04114 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
APOBP04114 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
APOBP04114 AC010350.1-201ENST00000504908 231 ntBASIC3.16□□□□□ -1.9
APOBP04114 MED28P5-201ENST00000528254 438 ntBASIC3.16□□□□□ -1.9
APOBP04114 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.16□□□□□ -1.9
APOBP04114 AC020915.5-201ENST00000596836 964 ntBASIC3.16□□□□□ -1.9
APOBP04114 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
APOBP04114 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC3.16□□□□□ -1.9
APOBP04114 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
APOBP04114 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
APOBP04114 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
APOBP04114 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC3.16□□□□□ -1.9
APOBP04114 USP6-205ENST00000574788 8464 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms