Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 MRPL32P1-201ENST00000406301 247 ntBASIC4.23□□□□□ -1.73
IFNA1P01562 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.23□□□□□ -1.73
IFNA1P01562 AC013429.2-201ENST00000418798 781 ntBASIC4.23□□□□□ -1.73
IFNA1P01562 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.23□□□□□ -1.73
IFNA1P01562 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
IFNA1P01562 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.23□□□□□ -1.73
IFNA1P01562 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
IFNA1P01562 GYG1P1-201ENST00000460864 698 ntBASIC4.23□□□□□ -1.73
IFNA1P01562 AC093827.1-201ENST00000480094 861 ntBASIC4.23□□□□□ -1.73
IFNA1P01562 RN7SL655P-201ENST00000486087 298 ntBASIC4.23□□□□□ -1.73
IFNA1P01562 AC073610.1-201ENST00000489971 396 ntBASIC4.23□□□□□ -1.73
IFNA1P01562 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.23□□□□□ -1.73
IFNA1P01562 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC4.23□□□□□ -1.73
IFNA1P01562 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC4.23□□□□□ -1.73
IFNA1P01562 AC122134.1-201ENST00000565664 1104 ntBASIC4.23□□□□□ -1.73
IFNA1P01562 NIFKP4-201ENST00000567275 1192 ntBASIC4.23□□□□□ -1.73
IFNA1P01562 AC068408.1-201ENST00000577406 1144 ntBASIC4.23□□□□□ -1.73
IFNA1P01562 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC4.23□□□□□ -1.73
IFNA1P01562 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.23□□□□□ -1.73
IFNA1P01562 MIR6849-201ENST00000618543 69 ntBASIC4.23□□□□□ -1.73
IFNA1P01562 MIR6807-201ENST00000621968 92 ntBASIC4.23□□□□□ -1.73
IFNA1P01562 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.23□□□□□ -1.73
IFNA1P01562 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
IFNA1P01562 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.23□□□□□ -1.73
IFNA1P01562 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.23□□□□□ -1.73
IFNA1P01562 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
IFNA1P01562 CR382285.2-201ENST00000624662 1495 ntBASIC4.23□□□□□ -1.73
IFNA1P01562 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
IFNA1P01562 AC063976.2-201ENST00000425667 3556 ntBASIC4.23□□□□□ -1.73
IFNA1P01562 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
IFNA1P01562 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
IFNA1P01562 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.22□□□□□ -1.73
IFNA1P01562 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
IFNA1P01562 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
IFNA1P01562 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
IFNA1P01562 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.22□□□□□ -1.73
IFNA1P01562 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.22□□□□□ -1.73
IFNA1P01562 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.22□□□□□ -1.73
IFNA1P01562 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
IFNA1P01562 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
IFNA1P01562 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.22□□□□□ -1.73
IFNA1P01562 AC083843.3-201ENST00000623679 2186 ntBASIC4.22□□□□□ -1.73
IFNA1P01562 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
IFNA1P01562 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
IFNA1P01562 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
IFNA1P01562 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.22□□□□□ -1.73
IFNA1P01562 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
IFNA1P01562 RN7SKP199-201ENST00000410325 305 ntBASIC4.22□□□□□ -1.73
IFNA1P01562 RN7SKP29-201ENST00000410957 272 ntBASIC4.22□□□□□ -1.73
IFNA1P01562 MARK2P12-201ENST00000420129 585 ntBASIC4.22□□□□□ -1.73
IFNA1P01562 EIF4A1P1-201ENST00000420241 934 ntBASIC4.22□□□□□ -1.73
IFNA1P01562 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC4.22□□□□□ -1.73
IFNA1P01562 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.22□□□□□ -1.73
IFNA1P01562 AC010086.1-201ENST00000437359 1052 ntBASIC4.22□□□□□ -1.73
IFNA1P01562 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.22□□□□□ -1.73
IFNA1P01562 PTMAP3-201ENST00000447474 330 ntBASIC4.22□□□□□ -1.73
IFNA1P01562 RPS6P2-201ENST00000454208 705 ntBASIC4.22□□□□□ -1.73
IFNA1P01562 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC4.22□□□□□ -1.73
IFNA1P01562 RN7SL583P-201ENST00000475692 287 ntBASIC4.22□□□□□ -1.73
IFNA1P01562 AP002453.1-201ENST00000492327 668 ntBASIC4.22□□□□□ -1.73
IFNA1P01562 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
IFNA1P01562 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.22□□□□□ -1.73
IFNA1P01562 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.22□□□□□ -1.73
IFNA1P01562 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.22□□□□□ -1.73
IFNA1P01562 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.22□□□□□ -1.73
IFNA1P01562 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC4.22□□□□□ -1.73
IFNA1P01562 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC4.22□□□□□ -1.73
IFNA1P01562 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC4.22□□□□□ -1.73
IFNA1P01562 HMGB1P19-201ENST00000517578 577 ntBASIC4.22□□□□□ -1.73
IFNA1P01562 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC4.22□□□□□ -1.73
IFNA1P01562 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC4.22□□□□□ -1.73
IFNA1P01562 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
IFNA1P01562 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC4.22□□□□□ -1.73
IFNA1P01562 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.22□□□□□ -1.73
IFNA1P01562 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.22□□□□□ -1.73
IFNA1P01562 AC010547.7-201ENST00000570323 333 ntBASIC4.22□□□□□ -1.73
IFNA1P01562 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.22□□□□□ -1.73
IFNA1P01562 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.22□□□□□ -1.73
IFNA1P01562 SMIM12P1-201ENST00000603004 274 ntBASIC4.22□□□□□ -1.73
IFNA1P01562 AC133552.5-201ENST00000604266 540 ntBASIC4.22□□□□□ -1.73
IFNA1P01562 AC018695.5-201ENST00000605872 315 ntBASIC4.22□□□□□ -1.73
IFNA1P01562 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.22□□□□□ -1.73
IFNA1P01562 AL122023.1-201ENST00000622847 530 ntBASIC4.22□□□□□ -1.73
IFNA1P01562 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.22□□□□□ -1.73
IFNA1P01562 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
IFNA1P01562 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
IFNA1P01562 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
IFNA1P01562 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
IFNA1P01562 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.22□□□□□ -1.73
IFNA1P01562 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
IFNA1P01562 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
IFNA1P01562 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
IFNA1P01562 AC023421.1-201ENST00000590535 1785 ntBASIC4.22□□□□□ -1.73
IFNA1P01562 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.22□□□□□ -1.73
IFNA1P01562 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
IFNA1P01562 AL929601.4-201ENST00000613011 1341 ntBASIC4.21□□□□□ -1.73
IFNA1P01562 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.73
IFNA1P01562 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
IFNA1P01562 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.73
IFNA1P01562 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms